Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02666 ATGCAAACAATGTCCGAAGAGAACATTGGACTGAAGAATTTTGACAGGTCATTTTTTCCCTCACCATCTCAGTGCCGTCACCGCCGTCGCTCACCTCTAGCTGCCGGTTACCTTCGCTCGCCGTTGCTGCCGGTCACCTTTGCTCATCGTTGTTGCCGGATAAAGCTGTTGGTGAAACAATGCCCAGGGGTTGTGCCATGTGCTGATATTCTTGCTCTGGCAGCTAGAGACTCTGTTGTTTATTTTGGGGGACCCTCATGGGAAGTAGGGTTGGGAAGAAGAGATTCTACCACTGCAAGCAGAAGTGATGCTAATATATCCATTCCTGCACCCTTCCTCAGTCTAACTGCTCTCATAAAGAATTTTGCTAACCAAGGGCTCTCAATTACAGACTTGGTTGCTCTTTCAGTTGTTGACCATTCTTGTGTACATGCTGCCATGAGTGTTCTTAAATTGAGTACATTGAATTGGCTTGGCAGCAGATTGAATGAGGAAATGATTGAAACATTGTTTGTAGTGAACGCACCAAACCAAAAACCCAAGGATGCCACTCTACACTCTATGCTCCCCCCAACTAATCAGGAGGACAGAGTACTTGATCCTAAAAAGTCTCAAAATATTGCAATCTTGCTCAAAGCTCTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTATTTTCTCATTCTGGCCTGAGGTGATGACTTTCTTTTCTATGGTTTTGTGTTAG 738 0.4431 MQTMSEENIGLKNFDRSFFPSPSQCRHRRRSPLAAGYLRSPLLPVTFAHRCCRIKLLVKQCPGVVPCADILALAARDSVVYFGGPSWEVGLGRRDSTTASRSDANISIPAPFLSLTALIKNFANQGLSITDLVALSVVDHSCVHAAMSVLKLSTLNWLGSRLNEEMIETLFVVNAPNQKPKDATLHSMLPPTNQEDRVLDPKKSQNIAILLKALNVTIEEVCEALLEGIFSFWPEVMTFFSMVLC* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02666 245 Pfam Peroxidase 55 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02666 245 PANTHER PEROXIDASE 72-RELATED 57 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02666 245 PRINTS Plant peroxidase signature 83 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02666 245 PRINTS Plant peroxidase signature 64 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02666 245 ProSiteProfiles Plant heme peroxidase family profile. 57 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02666 245 SUPERFAMILY Formin homology 2 domain (FH2 domain) 160 228 - -
Rops6g02666 245 Gene3D Formin, FH2 domain 147 235 IPR042201 -
Rops6g02666 245 SUPERFAMILY Heme-dependent peroxidases 59 141 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops6g02666 245 Pfam Formin Homology 2 Domain 164 228 IPR015425 -
Rops6g02666 245 Gene3D - 47 144 - -
Rops6g02666 245 PRINTS Haem peroxidase superfamily signature 65 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02666 245 PRINTS Haem peroxidase superfamily signature 83 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02666 Rops-Chr6 47947854 47953593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02666 57 183 Peroxidase AT4G36430 45.669 2.71e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02666 K00430 - gmx:100793973 139.043