Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops6g02664 | ATGTCCACTATCACTTCAAAATGGTTTGGAGAAGCTGAAAAGAATGTCCGAGCTCTGTTTTCACTAGCAACAAAAATTGCCCCAACTATTATTTGTATAGATGAGGCTGATAGCATGCTTGGGCAGCAGTCCAGAGTCAGGGAGCACGAGGCAATAAGAAAGATCAAAAATGAATTTATGTCCCACTGGGATGGGCTATTATCAAATCCTGTTGAGCAAATTCTGATTCTTGCTGCCACCAACAGTCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTCAGCAGAGGATCATGGTCGGTCTTCCATCTACGGAGAGTAGAGAAATGATCTTGAAAAACTGGAAACAGGATCTGTGCATGACTGCGGCTCATCAACCTGTACTACATGAGGAGAGGGTGAAGGAAATGGAAAAGAAGAAGAGGGAGGCAGAAGCTCAAAGCTCAGAAGATGCATCCAAAGCTACAAAAGATAAAGAAAATCAAGTGATCACCCTGAGGCCTTTAAACATGGAAGACATGAGACAGGCAAAGAGTAAGGTGGCTGCAAGTTTTGCTGCAGAAGGATCAATGATGAGTGAGCTGAAGCAGTGGAATAATTTGTTCGGAGAAGGAGGTTCAAGGAAGAAAAATCAGCTCACTTATTTCCTTTAG | 654 | 0.4266 | MSTITSKWFGEAEKNVRALFSLATKIAPTIICIDEADSMLGQQSRVREHEAIRKIKNEFMSHWDGLLSNPVEQILILAATNSPFDLDEAIIRRFQQRIMVGLPSTESREMILKNWKQDLCMTAAHQPVLHEERVKEMEKKKREAEAQSSEDASKATKDKENQVITLRPLNMEDMRQAKSKVAASFAAEGSMMSELKQWNNLFGEGGSRKKNQLTYFL* | 218 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops6g02664 | 217 | MobiDBLite | consensus disorder prediction | 135 | 164 | - | - | |
Rops6g02664 | 217 | Pfam | ATPase family associated with various cellular activities (AAA) | 2 | 101 | IPR003959 | GO:0005524|GO:0016887 | |
Rops6g02664 | 217 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 1 | 216 | - | - | |
Rops6g02664 | 217 | ProSitePatterns | AAA-protein family signature. | 74 | 93 | IPR003960 | GO:0005524|GO:0016887 | |
Rops6g02664 | 217 | Gene3D | - | 103 | 181 | - | - | |
Rops6g02664 | 217 | Coils | Coil | 134 | 154 | - | - | |
Rops6g02664 | 217 | MobiDBLite | consensus disorder prediction | 135 | 161 | - | - | |
Rops6g02664 | 217 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 123 | IPR027417 | - | |
Rops6g02664 | 217 | Gene3D | - | 2 | 199 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops6g02664 | Rops-Chr6 | 47912100 | 47913981 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops6g02664 | 6 | 121 | Calmodulin-binding Proteins | AT3G56690 | 35.433 | 9.55e-15 | 70.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops6g02664 | - | - | gmx:100804099 | 311.227 |