Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02661 ATGTACCTTAAAATTCACTATCTGTTCCTCACCCTTGTTTTTTCCACTGTCATCACCACCACTGTTTCCATCAACCCAGGTTCCACCCTTTCTGCCTCCAACATCAACCAGTCATGGTCTTCAGCCAGCTCCACCTTCTCCCTCGCCTTTGTCTCCGTCGAGCCACAAACATCTCCTCCTTCCTTCATCGCCGCCATTTTCTACACCGGCGGGGCCCCCGTGGTCTGGTCAGCCGGTAACGGCACCGCCGTTGACTCCGGCGGGTCCTTCCGTTTCCTCTCCTCCGGTGCCCTTCATCTCGTGAACGGCTCCGGAGCCGTTGTCTGGGACGCCGGCACGGCGAATCTCGGCGCCACGTCAGCCACCCTGGAAGAGAGTGGCAATTTGGTAATTTCCAATGGCAGCCACACCGTTTGGTCAAGCTTTGACCACCCCACTGATACCCTTTTGCCTTCTCAGAATTTTACTGTTGGTAAGGTTCTGACATCTAAACCTTACTCTTTTAGTCTCACAGGGATTGGAAATTTGACCCTGAAGTGGAATGATAGCGTTATTTACTGGAATCAGGGTTTGAATTCTTCTGTGAATGTGAGTTTAAATTCTCCTGTTTTGGGGTTGCTGCCCATAGGAATTTTGCAGATTTCTGATGCTAATTTGAATACTCCTGCTCTTGTTGCTTATAGCAGTGACTATGCAGAAGGGGGGAGTGATATTTTGAGAGTGTTGAAGTTGGATAATGATGGGAATTTGAGGATTTATAGCACATCTAGGGGGAGTGGAAATCCTATTTCTAGATGGGCTGCTGTTCAGGATCAGTGTGAGGTTTATGCTTATTGTGGGAACTATGGTATTTGCAGTTATAATGATTCAAGTCCAGTTTGTGGGTGCCCATCTGAGAATTTTGAGATGATTGATCCAAATGATAGTAGGAAAGGGTGTAGGAGGAAGGTGAGTCTTGACAATTGTCAAGGGAATTCAACTATGTTGACATTGGATCATACTCAGTTCTTGACTTATGTCCCTGACATAGAGTCACAGACGTTTTTTATTGGTATATCAGCATGTAGAGGGAATTGTCTTTCAGGCTCAGGAGCTTGTTATGCTTCTACTTCTTTGTCAGATGGAACGGGGCAATGTTACATTAAATCAGTAGATTTTGTTAGTGGATATCATAGTCCTTCACTACCTAGCACTTCTTATGTCAAGGTTTGCCCGCCGCTGGCACCGAATCCACCACCCTCTATGGAGGAGACTGTGAAGGAAAAGAGTTCGAGGGTACCTGCTTGGGTTGTGGTGGTTGTGGTTTTGGGTACCCTTATAGTTTTGGTTGCCTTTGAAGGTGGTTTGTGGATGTGGTGTTGTAGGAACAGTGCAAGATTTGGTGGATTGTCTGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCACCAGTCCAGTTCTCGTACAAAGAGCTCGAGCGTGCAACAAAGGGGTTCAAGGAGAAGCTTGGGGCTGGCGGATTTGGTGCTGTGTATAGAGGAATTCTTGTTAACAAAACTGTTGTTGCGGTGAAGCAACTTGAAGGCATTGAGCAAGGTGAGAAACAGTTTAGGATGGAAGTTGCAACTATAAGCAACACTCATCATCTGAATTTGGTGAGGCTTATTGGCTTTTGCTCAGAAGGGCGCCACAGGCTTTTAGTTTATGAGTTCATGAAAAATGGGTCTCTTGATAATTTTTTATTCCTGACAGCAGAACATTCTGGAAAATTGTTGAATTGGGAGTATCGATTCAACATTGCCCTAGGCACTGCAAGAGGCATCACGTACCTTCATGAGGAGTGTCGTGACTGCATAGTCCATTGTGATATAAAACCTGAAAACATTCTCTTGGAAGAGAATTACATTGCTAAAGTCTCTGATTTTGGTCTTGCAAAGCTCATTAATCCCAAGGATCATAGGCACCGGACCTTGACAAGTGTGAGAGGAACTAGAGGATATTTAGCCCCCGAGTGGCTTGCAAATCTTCCTATAACATCCAAATCTGATGTTTATAGCTATGGCATGGTTTTGTTGGAGATTGTGAGTGGGAGGAGGAATTTTGAAGTCTCAGAGGAAACAAATAGGAAGAAGTTCTCCATTTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAACGGAATTTTGGACAAAAGACTGGATGACCAAGAAGTTGATATGGGGCAGGTGATGAGAGCGATTCAGGTAAGCTTTTGGTGCATTCAAGAGCAGCCATCTCAAAGACCAATAATGAGCAGAGTAGTGCAAATGCTAGAAGGGGTAAAAGAGATTGAGAAGCCACCAGCCCCAAAATCTGTGGTTGAAGGACCTGTTAGTGGAACCAGCACATTCATCAGTAGCAATGCCAGTGCATTCTCCACGGTTGGAGTTTCACCCCAGGGTCCTTCCTCATCATCATCATTCCAGGCTAGTGGTGGTGTTTCAACCTTCACCTCAGGAAGGAACATTGAGAAGGCAAGTTCATCCCTTTTACAATCAGAACCATGA 2526 0.4541 MYLKIHYLFLTLVFSTVITTTVSINPGSTLSASNINQSWSSASSTFSLAFVSVEPQTSPPSFIAAIFYTGGAPVVWSAGNGTAVDSGGSFRFLSSGALHLVNGSGAVVWDAGTANLGATSATLEESGNLVISNGSHTVWSSFDHPTDTLLPSQNFTVGKVLTSKPYSFSLTGIGNLTLKWNDSVIYWNQGLNSSVNVSLNSPVLGLLPIGILQISDANLNTPALVAYSSDYAEGGSDILRVLKLDNDGNLRIYSTSRGSGNPISRWAAVQDQCEVYAYCGNYGICSYNDSSPVCGCPSENFEMIDPNDSRKGCRRKVSLDNCQGNSTMLTLDHTQFLTYVPDIESQTFFIGISACRGNCLSGSGACYASTSLSDGTGQCYIKSVDFVSGYHSPSLPSTSYVKVCPPLAPNPPPSMEETVKEKSSRVPAWVVVVVVLGTLIVLVAFEGGLWMWCCRNSARFGGLSAQYALLEYASGAPVQFSYKELERATKGFKEKLGAGGFGAVYRGILVNKTVVAVKQLEGIEQGEKQFRMEVATISNTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFLTAEHSGKLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLEENYIAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEVSEETNRKKFSIWAYEEFEKGNINGILDKRLDDQEVDMGQVMRAIQVSFWCIQEQPSQRPIMSRVVQMLEGVKEIEKPPAPKSVVEGPVSGTSTFISSNASAFSTVGVSPQGPSSSSSFQASGGVSTFTSGRNIEKASSSLLQSEP* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02661 841 Gene3D - 15 142 IPR036426 -
Rops6g02661 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 145 268 - -
Rops6g02661 841 PANTHER OS07G0415500 PROTEIN 9 776 - -
Rops6g02661 841 CDD STKc_IRAK 496 766 - -
Rops6g02661 841 SMART blect_4 30 145 IPR001480 -
Rops6g02661 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 144 - -
Rops6g02661 841 Gene3D Phosphorylase Kinase; domain 1 463 564 - -
Rops6g02661 841 Pfam S-locus glycoprotein domain 233 297 IPR000858 GO:0048544
Rops6g02661 841 Pfam Protein kinase domain 493 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02661 841 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 191 IPR036426 -
Rops6g02661 841 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Rops6g02661 841 ProSiteProfiles Bulb-type lectin domain profile. 15 144 IPR001480 -
Rops6g02661 841 PIRSF SRK 1 814 IPR024171 GO:0004674
Rops6g02661 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Rops6g02661 841 SMART serkin_6 490 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02661 841 Pfam D-mannose binding lectin 74 160 IPR001480 -
Rops6g02661 841 ProSiteProfiles Protein kinase domain profile. 490 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02661 841 MobiDBLite consensus disorder prediction 799 841 - -
Rops6g02661 841 ProSiteProfiles Bulb-type lectin domain profile. 146 265 IPR001480 -
Rops6g02661 841 SUPERFAMILY Protein kinase-like (PK-like) 473 765 IPR011009 -
Rops6g02661 841 Gene3D Transferase(Phosphotransferase) domain 1 565 778 - -
Rops6g02661 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 774 - -
Rops6g02661 841 Gene3D - 143 268 IPR036426 -
Rops6g02661 841 FunFam S-receptor-like serine/threonine-protein kinase 464 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02661 Rops-Chr6 47908295 47911285 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02661 431 774 Receptor kinase-like Gene Family AT5G20050 41.737 9.76e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops6g02661 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02661 - - cam:101506838 1333.16