Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02660 ATGGAGCTCAATAATGAAGCGGTTGATGGGAAGGACATCAAAGTCACATTTGATGAGTTCCCTTATTACTTAAGTGAAAGAATCCGATTTTTGTTGAAAATTGCTGGATATGTTCATTTAAAACAAGAACTCTTATCCAAGCACACGAGGAACCTTTCACCACCAAGCAGAGCTATTTTGCTTTCTGGACCTGCAGAACCTTATCAGCAAATGCTTGTCAGAGCTTTAGCACATTATTTTGAATCAAAGTTACTGTTGCTAGATATTACTGACTTTTCCTTGAAGATGCAGAGCAAATACGGATGTTCTAGAAAAGAACAATGCACAAGCCCCTTCTGTTTTGATGAAAAGCTCTTTGTGCAGTCACTTTACAAGGTCTTGGTTTCTATATCAGAAACTGGTTCCATTATTTTATACATCAAAGCTGTTGAGAAGCTCTTTCTTCGATCACCAAGGTTATACAATTTATTCAAAAAGTTAATAAAGAAACTTTCGGGGTCAGTGTTAATACTTGGTTCCTGGATCTGTGATTCTGAAGATGATTGCACAGAAGTTGATGAAAAGCTCACCATGTTATTCCCTTCCAACATTGAGATCAAACTGTCTCAAGATGAGACTCATCTTGAGAACTGGAAAACCCAACTAGAAGAGGACACGAAAATAATTCAGTTTAAAGATAACACAAACCACATTGCTGAAGTACTTGCAGCAAATGACGTTGATTGTGATGATTCGAATTCAATTTGCCATGCTGACACCATGCTACTCAATAATTGTATTGAAGAGATTGTGGTATATGCAATTTCTTACCACTTGATGGATACCAAATATCCAGAATACCGAAATGGAAAGCTAATCATATCAGCCAAGAGTTTGTTGCAGGTATTGAGTATGTACCAGGAAGGGGAATCGAACAAGGAAATTCCTCTTGACAATGAGTTAGAGGAGCACATAAGATCAGAGGTTATACCTGCAAAAGAGATAAAGGTTACATTTACAGATATTGGTGCATTGGATGATATCAAAGAATCACTTCAAGAATTGGTCCTACTTCCCCTTAGAAGACCAGACCTATTCAAAGGTGGACTTCTGAAGCCTTGTAGAGGTGTATTGCTTTTTGGACCTCCTGGAACAGGAAAAACAATGCTTGCAAGGGCAATTGCAAATGAAGCTAGAGCAAGTTTCATTAATGTCTCATTGTCCACCATCACTTCAAAATGGTTTGGAGATGCTGAAAAGAATGTCCGAGCTTTGTTTTCATTAGCAGCAAAGATGGCCCCAACTATTATTTTTGTTGATGAGGCTGATAGTATGCTTGGGCAGCGGTCTAGAGATGGGGAGCATGAGGTAATGAGAAAAATAAAAAATGAATTCATGTCTCACTGGGATGGGCTATTGTCTAAACCTGGTGAGCAAATTCTGGTTCTTGCTGCCACCAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGATTTCAGTGCAGGATCATGGTTGGTCTTCCATCTGTTGAAAGCAGGGAAATGATATTGAAAACTCTCTTAGCTAAGGAAAAAAATGAAAACATAGACTTCAAAGAGCTTTCGACTATGACAGAAGGATATACTGGAAGTGACCTTAAGAATTTGTGCACGACTGCGGCTTATGGACCTGTTAGGGAGCTATTACAACAGGAGAAGATAAAGGAAATGGAAAAGAAGAAAAGGGAGGCAGAAGTTCAAAGCTCTGAAGATGCTTCCAATGCTACAGTAGACAAAGAAGACCAAGTGATCACAATGAGGCCTTTAAACATGGAAGACATGAGACATGCAAAGAGTAAGGTGGCTGCAAGTTTTGCTGCAGAAGGATCAATAATGAGTGAGCTGAAGCAGTGGAATGAATTGTATGGTGAAGGAGGTTCAAGGAAGAAAATGCAGCTCACTTATTTCCTTTAG 1935 0.3907 MELNNEAVDGKDIKVTFDEFPYYLSERIRFLLKIAGYVHLKQELLSKHTRNLSPPSRAILLSGPAEPYQQMLVRALAHYFESKLLLLDITDFSLKMQSKYGCSRKEQCTSPFCFDEKLFVQSLYKVLVSISETGSIILYIKAVEKLFLRSPRLYNLFKKLIKKLSGSVLILGSWICDSEDDCTEVDEKLTMLFPSNIEIKLSQDETHLENWKTQLEEDTKIIQFKDNTNHIAEVLAANDVDCDDSNSICHADTMLLNNCIEEIVVYAISYHLMDTKYPEYRNGKLIISAKSLLQVLSMYQEGESNKEIPLDNELEEHIRSEVIPAKEIKVTFTDIGALDDIKESLQELVLLPLRRPDLFKGGLLKPCRGVLLFGPPGTGKTMLARAIANEARASFINVSLSTITSKWFGDAEKNVRALFSLAAKMAPTIIFVDEADSMLGQRSRDGEHEVMRKIKNEFMSHWDGLLSKPGEQILVLAATNRPFDLDEAIIRRFQCRIMVGLPSVESREMILKTLLAKEKNENIDFKELSTMTEGYTGSDLKNLCTTAAYGPVRELLQQEKIKEMEKKKREAEVQSSEDASNATVDKEDQVITMRPLNMEDMRHAKSKVAASFAAEGSIMSELKQWNELYGEGGSRKKMQLTYFL* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02660 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 326 556 IPR027417 -
Rops6g02660 644 SMART AAA_5 366 503 IPR003593 GO:0016887
Rops6g02660 644 Coils Coil 554 574 - -
Rops6g02660 644 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 329 504 - -
Rops6g02660 644 Gene3D - 329 501 IPR027417 -
Rops6g02660 644 Gene3D - 502 582 - -
Rops6g02660 644 Pfam ATPase family associated with various cellular activities (AAA) 370 500 IPR003959 GO:0005524|GO:0016887
Rops6g02660 644 ProSitePatterns AAA-protein family signature. 473 492 IPR003960 GO:0005524|GO:0016887
Rops6g02660 644 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 2 643 - -
Rops6g02660 644 Pfam AAA+ lid domain 522 561 IPR041569 -
Rops6g02660 644 MobiDBLite consensus disorder prediction 566 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02660 Rops-Chr6 47897583 47904877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02660 329 607 Calmodulin-binding Proteins AT3G56690 36.268 1.11e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02660 - - hsyr:120200110 853.588