Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02656 ATGGCTCCCAAAAAGATCGATTCCGACGACGGTGCCAGTCTTGGTTGCTGCATTTCGAGCCAGATTGGTTTAGGCTCGAGATTATTGGCTAGTAAGGACCAAACATGGGTTTCTGAAAACGGCACATTTGCTATGGGGTTCACTCCAGCAGACACTGATGATAATCGATTGTTTATGATGGCCATTTGGTTTGCAAAGCTTCCAGGAGATCGAACTTCAGTTTGGTCACCCAATAGAGGCTCTCCTGTATCTAAAGATGCAATCTTGGAGCTTGACACCACTGGCAACCTCGTTCTAATGGATGGAGACATCACCATATGGGCCTCAAACACCTCAGGTGCTGGTGTAGAAGCAGCAATCATGGCAGAATCCGGAAACTTCATCCTTCATAACACCAACAATCACCCTGTGTGGCAGAGTTTTTATCAACCTTCTGACACACTCCTCCCTAACCAGCCTCTAACAGTTTATTCAGAATTAACATCATCAAAGACGGAACATGGTGGCTACTATGCTCTAAAAATGCTTCAACAGCCTACTTCCTTAAGCCTTGCACTGACTTACAATCTGGCAGAAACTTACCAGCCTTTAGATGAAACATACACCAACTATTCCTATTGGCAAGGTCCTGATATCTCCAATGTGACTGGGGAAGTTATAGCAGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTCTATGGAGAGTCTTCTGATGGAGCAGTTTATGTGTACAAGAATGATGATGATGATGCAGGTTTGTCTTCTGCAATTCATCAATCTACACCATCAACTGTTCTTCGGAGACTGACACTGGAAAAGAATGGCAATTTGCGTTTGTACAGTTGGAATGATGTAAATGGATCAAGACAGTGGGTGCCACAGTGGGCTGCAGTGTCAAATCCATGTAATATTGCTGGAATTTGTGGCAATGGGGTTTGTAACTTGGATAGAAGTAAGACAAGAGCCTCTTGCACTTGCTTGCCAGGAACTACTAAAGCTGGCAGGGACGGCATATGCTATGAGAATTCATCGCTTGTCGGAAAATGCAATGGCCAACATCATGAAAACCAGACATCCCAATTTAGGATGTCAATGGTGCAGCAAACTAATTATTATTTTTCTGAATCTTCAGTAATAGCTAACTATAGTGATGTTGCTTCTGTATCAAAATGTGGGGATGCTTGCTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGACTAAATGAGGAGAGACCATACTGCTGGGTGTTGAGGAGCTTGAGTTTTGGTGGTTTTGAGGATACCAGCTCAACTTTATTTGTGAAGGCAAGATCAAATGGCTCATGGACACCAGAAGGCCAAGCGGGAGGGTCTAATAGTTCTTCTGATGGATTGGGGAGTGCCAAGGAGAAGGCTGTGATTATTCCCATTGTTCTAAGCATGGTAGTTCTCATTGTTTTGCTTTGTTTGTTACTGTATTACAGTGTTCACAGAAAAAGAACTTTGAGAAGAGAGATGGAAAGTTCCTTGATCTTATCAGGTGCTCCAATGAATTTCACCTACCGTGATCTGCAAATCAGGACAAGCAACTTTTCACAGCTTTTAGGAACAGGTGGATTTGGTAGTGTGTATAAAGGAAGCCTGGGAGATGGTACCCTAGTGGCAGTGAAGAAACTTGATAAGGTTTTGCCCCATGGAGAGAAAGAATTTATCACTGAAGTAAACACCATTGGATCAATGCATCATATGAATTTGGTTCGCCTATGTGGCTATTGTTCAGAGGGATCACACCGACTTCTGGTTTATGAGTTCATGAAGAATGGATCCTTGGATAAATGGATCTTCCCTTCATATCAAGGGCGAGATAGATTGCTAGATTGGTCAACTCGGTTCGATATAGCCATAGCTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGAGACCGGATAATACATTGTGACATCAAACCAGAAAACATATTGTTAGATGAAAACTTTTGTCCTAAAGTATCCGATTTTGGACTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTAACAATGATCAGAGGCACTAGAGGTTATTTAGCACCAGAATGGGTTAGTAATCGCCCTATAACTGTTAAAGCTGATGTTTACAGCTATGGGATGCTTCTTCTAGAAATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGATGCAGAAGACTTTTTCTATCCTGGTTGGGCTTACAAGGAGATGACAAATGGATCACCAATGCAAGTGGCAGATAGAAGATTAAATGGGGCAGTTGATGAAGAAGAGCTAATCAGAGCTTTGAAAGTTGCCTTTTGGTGCATCCAAGATGAGGTTTTCATGCGACCACCAATGGGGGAAGTGGTGAGGATGCTGGAAGGTTCAGTCAACATTAATATGCCACCAATGCCCCAGACAGTTCTAGAGTTAATTGAGGAAGGCTTAGATCATGTATACAAAGCTATGAAAAGAGAATATAACCATTTCAGCTCATTCACCATTACCAGCCATCTTACATCTCATGCTACATGTAGCAATTCCACAATGTCACCAAGATAG 2568 0.4245 MAPKKIDSDDGASLGCCISSQIGLGSRLLASKDQTWVSENGTFAMGFTPADTDDNRLFMMAIWFAKLPGDRTSVWSPNRGSPVSKDAILELDTTGNLVLMDGDITIWASNTSGAGVEAAIMAESGNFILHNTNNHPVWQSFYQPSDTLLPNQPLTVYSELTSSKTEHGGYYALKMLQQPTSLSLALTYNLAETYQPLDETYTNYSYWQGPDISNVTGEVIAVLDQAGSFGIVYGESSDGAVYVYKNDDDDAGLSSAIHQSTPSTVLRRLTLEKNGNLRLYSWNDVNGSRQWVPQWAAVSNPCNIAGICGNGVCNLDRSKTRASCTCLPGTTKAGRDGICYENSSLVGKCNGQHHENQTSQFRMSMVQQTNYYFSESSVIANYSDVASVSKCGDACLSDCDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLFVKARSNGSWTPEGQAGGSNSSSDGLGSAKEKAVIIPIVLSMVVLIVLLCLLLYYSVHRKRTLRREMESSLILSGAPMNFTYRDLQIRTSNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDKVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWSTRFDIAIATAQGIAYFHEQCRDRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMIRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFDAEDFFYPGWAYKEMTNGSPMQVADRRLNGAVDEEELIRALKVAFWCIQDEVFMRPPMGEVVRMLEGSVNINMPPMPQTVLELIEEGLDHVYKAMKREYNHFSSFTITSHLTSHATCSNSTMSPR* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02656 855 ProSiteProfiles Bulb-type lectin domain profile. 21 142 IPR001480 -
Rops6g02656 855 FunFam Serine/threonine-protein kinase 23 142 - -
Rops6g02656 855 PIRSF SRK 12 846 IPR024171 GO:0004674
Rops6g02656 855 Pfam D-mannose binding lectin 72 156 IPR001480 -
Rops6g02656 855 PANTHER OS07G0415500 PROTEIN 18 807 - -
Rops6g02656 855 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 599 805 - -
Rops6g02656 855 Pfam Protein kinase domain 526 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02656 855 FunFam serine/threonine-protein kinase PBS1-like 491 598 - -
Rops6g02656 855 SMART serkin_6 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02656 855 CDD B_lectin 31 144 IPR001480 -
Rops6g02656 855 Pfam S-locus glycoprotein domain 242 329 IPR000858 GO:0048544
Rops6g02656 855 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 146 IPR036426 -
Rops6g02656 855 Gene3D - 19 141 IPR036426 -
Rops6g02656 855 Gene3D Phosphorylase Kinase; domain 1 487 598 - -
Rops6g02656 855 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
Rops6g02656 855 Gene3D Transferase(Phosphotransferase) domain 1 599 811 - -
Rops6g02656 855 SUPERFAMILY Protein kinase-like (PK-like) 501 796 IPR011009 -
Rops6g02656 855 CDD STKc_IRAK 529 797 - -
Rops6g02656 855 SMART blect_4 27 144 IPR001480 -
Rops6g02656 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Rops6g02656 855 ProSiteProfiles Protein kinase domain profile. 523 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02656 Rops-Chr6 47822958 47829387 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02656 477 805 Receptor kinase-like Gene Family AT5G20050 44.101 1.74e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops6g02656 Pkinase 5.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02656 - - gmx:100794281 1487.63