Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02632 ATGGCGGGATTTTGGGCTGTGTTTTGTGGAGAATCTGGTTGTTCAGAGACTGGAATAAAGCATTGCAGTTATGATTTTAAGTTTCTCATTGATCCTTCCACATGTATCAACCATCTGTTGATCTCTTGCTTTGATGTTTTGCTGCTCATCATGCTCTTATTTATGATGATCCAGAAGTCATCATTAAAACCATTTCAGGGTCTAAAACGGCGGCAAATATATTCAACTTTGCAGCTAGTTTCTGCCATGGCCAATGGTGCACTTGGGTTGATGCAATTGTTTTTAGGCATTTGGGTTTTAGAGGAGAAGTTGAGGAAAAGCCAAACTGCTTTACCTCTTAATTTGTGGCTGCTAGAATTCTTTCAGGGAGTAACATGGTTGTTAGTGGGTTTAACAATAAGTCTTAAGTTGAAACAACTTCCAACAGCATGGTTAAGGCTTTTTTCTATTCTAATCTTCTTGGTTTCTGGTATTTTCTGTGCTTTCTCCTTGTTCTATGCAATCAGCAATAGAGAACTGTCCCTCAAGGTAGCTTTAGATGTTCTATCATTTCCAGGGGCAATATTATTACTATTATGCACATATAAGGAATCTAAGTATGGGGACACTGACAGAGAAGTCGATGAAAGCCTTTATACCCCTTTAAATGGTGAGTCCAATAAAAATGATTCTATTGGCTATGTATCCCTATTTGCCAAAGCTGGACTCTTCAGTAGGATGTCATTTTGGTGGCTGAATCCATTGATGAAAAGGGGTAAAGAGAAAACACTTCAGGATGAAGATATCCCAAAGTTGGGGGAGGAAGATAGAGCAGAAAGTTGTTATTTGCTGTTTCTAGACCAACTGAACAAGCAGAAACAGAAGGATCCATCCTCACAACCATCAATTTTGAGGACAATAATTTTGTGCCACTGGAGAGAAATTTTGACATCAGGATTCTTTGCATTGCTCAAGGTACTTGCTCTATCTTCTGGACCTTTACTTCTGAATTCCTTTATATTGGTTGCTGAGGGTAATGAGAGTTTCAAATACGAAGGTTTTGTATTGGCCATATCACTTTTCTTCACAAAAATCATAGAATCCTTATCACAAAGGCAGTGGTACTTCCGCTCCAGACTCATTGGTCTGAAAGTTAAGTCCTTACTAACTGCAGCCATTTATAGAAAGCAACTGAGGTTATCCAATTCTGCTAGATTGATGCATTCAGGTGGTGAGATAATGAATTATGTGACTGTGGACGCTTACAGAATAGGTGAATTTCCCTATTGGTTTCACCAGACATGGACAACTAGCTTCCAGCTATGTATCTCACTAGTAGTACTTTTCCGTGCCGTTGGACTAGCTACAATTGCCTCCTTGGTGGTGATAGTTATCACAGTGCTCTGCAATACTCCACTTGCAAAGTTACAGCACAAGTTTCAAAGCAAACTTATGGTGGCACAAGATGAGAGATTGAAGGCGAGTTCTGAGGCTCTTGTGAATATGAAGGTGTTGAAGTTGTATGCATGGGAAACCAATTTTAAAAATGCTATAGAAGCATTAAGGAATGTGGAACTCAAATGGTTGTATGCAGTGCAATTGAGAAAGGCATACAACACCTTTCTCTTTTGGTCCTCACCTGTTTTGGTCTCTGCTGCTACCTTTGGGGCATGTTACTTTCTTAATGTTCCCTTGCATGCAAATAATGTTTTCACTTTTGTGGCTACTTTACGCCTTGTTCAAGATCCAATTAGAACCATCCCTGATGTTATTGGGGTGGTCATTCAGGCACAAGTTGCATTTGCCAGGATTGTAAAATTCCTGGAGGCACCTGAACTGCAAGTTGCAAATGTTAGGAAGAAGTGTTCTAGTGATAATATGAGAAGCTCAATTTCAATCAAGTCTGCTGACTTTTCATGGGAAGATAATGCATCAAAGCCAACACTAAGAAACATAAATTTGGAGGTTAGACCTGGAGAAAAGGTGGCTATTTGTGGAGAGGTTGGCTCAGGAAAATCGACTCTCTTAGCAGCAATTCTCAGAGAAATTCCTAATACTCAGGGAACAATTAATGTTTATGGCCAGTTTGCCTACATTTCTCAAACAGCATGGATACAAACAGGTACAATAAGGGAAAATATATTGTTTGGATCAGCTATGGATGCTCAAAAATATCAAGAAACGCTTCATAGGTCTTCACTAGTGAAGGACCTTGAGTTGTTTTCCTATGGTGATCTTACTGAAATTGGAGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCTCGTGCTCTGTATCAGAATGCTGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACAAACTGCCACAAATTTGTTCACCGAATACATTATGGAAGGACTTGCTGGGAAGACAGTCTTGCTTGTGACTCATCAAGTTGATTTCCTTCCGGCATTTGATTCTGTTTTGTTGATGTCAGATGGGGAAATCATACAAGCTGCACCTTATCACCATCTGTTGAACTCAAGCCAAGAATTTCAGGACCTTGTGAATGCTCACAAAGAGACTGCTGGTTCTGACAGGCTTGTGGATGTTACTAATTCCCAGAGACATTCAAATAGTGCTAAAGAGATTAGGAAAACATATGTGGAGAATGATAATCAGTTTGAAGCATCAAAAGGAGATCAATTGATTAAGCAAGAAGAGAGAGAAAGTGGAGACCAAGGATTTAAGCCTTACATAGAGTATCTGAATCAGAACAAAGGATATATCTACTTCTCTGTGGCTTCTCTCTCTCACGTTATCTTTGTGATTGGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAATCCTCAAGTCACCACTTTGAGATTGATTCTAGTTTACTTGTTGATTGGAGTTGCTTCAACAATATTCTTATTGATGAGAAGTCTTTTCACAGTTGCTATGGGCCTTCAATCATCAAAGTCTTTATTTTTACAGCTACTGAATTCCCTTTTTCGTGCTCCCATGTCATTTTATGACTCCACGCCTTTGGGACGGATACTTAGTAGGGTCTCCTCTGATCTCAGCATTGTTGATCTTGATGTCCCATTTGGCTTTCTTTTTGCTGTGGGAGCTACTACAAATTGTTACGCTAATCTTACAGTTTTAGCAGTAGTTACTTGGCAAGTCTTGTTTGTCTCCATACCAATGATTTATTTTGCAATTCGTTTGCAGAAATATTACTTTGCCTCTGCAAAAGAATTGATGAGGATGAATGGCACAACAAAATCCTTCATAGCTAACCATCTAGCTGAATCTGTTGCTGGAGCTGTGACAATAAGAGCTTTTGAGGAGGAAGATCGTTTCTTCATGAAGAACCTTGATCTAATTGATGTCAATGCTACTCCTTTCTTTCATAGTTTTGCTGCAAATGAGTGGCTGATTCAACGGTTAGAAACAGTCAGTGCAGTTGTTCTTGCATCTGCGGCACTTTGCATGGTTGTACTTCCACCTGGTACATTCACCTCTGGACTTATTGGCATGGCTCTCTCTTATGGACTTTCACTTAATGCTTCCTTAGTGTTTTCAATTCAAAATCAATGCAATATAGCAAATTACATAATATCAGTGGAGAGGTTAAATCAATATATGCATATACCAAGTGAGGCCTCAGAAGTAATAGAAGGAAATCGTCCTCCTGTGAATTGGCCAGTAGCTGGTAGAGTAGAAATAAATGAACTGCAGATACGATACAGGCCTGATGCACCACTAGTACTACGAGGGATCACATGCACATTTGAAGGAGGGCACAAAATTGGTATTGTTGGCAGGACAGGGAGTGGCAAGTCCACTCTCATTGGTGCTTTATTCCGTCTTGTGGAGCCAGCTGGTGGAAAAATCATAGTTGATGGCATTGACATTTGTTCCATTGGACTTCATGATTTGAGGTCGCGTTTTGGTATCATACCTCAGGACCCTACTCTTTTCAATGGGACAGTCAGATACAATTTGGACCCGTTATCTCAACACTCTGATCGAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGCTGTTCAAGAGAAAGAAGAAGGTTTAGACTCCTCAGTTGTTGAAGCTGGGGCAAACTGGAGCATGGGACAACGACAGTTATTCTGTTTGGGGCGTGCTCTTCTAAGGAGAAGCCGAATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAATGCTACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTACGGATTGTACAGTAATCACAGTAGCTCACAGGATACCAACTGTGATGGATTGCACCAAGGTTCTTGCCATCAGTGATGGAATACTGGTAGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCACTGTTTGGGAAGCTTGTCAAAGAATACTGGTCTCATTTTCAGTCTGCCGAATCTCATTGA 4446 0.4031 MAGFWAVFCGESGCSETGIKHCSYDFKFLIDPSTCINHLLISCFDVLLLIMLLFMMIQKSSLKPFQGLKRRQIYSTLQLVSAMANGALGLMQLFLGIWVLEEKLRKSQTALPLNLWLLEFFQGVTWLLVGLTISLKLKQLPTAWLRLFSILIFLVSGIFCAFSLFYAISNRELSLKVALDVLSFPGAILLLLCTYKESKYGDTDREVDESLYTPLNGESNKNDSIGYVSLFAKAGLFSRMSFWWLNPLMKRGKEKTLQDEDIPKLGEEDRAESCYLLFLDQLNKQKQKDPSSQPSILRTIILCHWREILTSGFFALLKVLALSSGPLLLNSFILVAEGNESFKYEGFVLAISLFFTKIIESLSQRQWYFRSRLIGLKVKSLLTAAIYRKQLRLSNSARLMHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVVLFRAVGLATIASLVVIVITVLCNTPLAKLQHKFQSKLMVAQDERLKASSEALVNMKVLKLYAWETNFKNAIEALRNVELKWLYAVQLRKAYNTFLFWSSPVLVSAATFGACYFLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAQVAFARIVKFLEAPELQVANVRKKCSSDNMRSSISIKSADFSWEDNASKPTLRNINLEVRPGEKVAICGEVGSGKSTLLAAILREIPNTQGTINVYGQFAYISQTAWIQTGTIRENILFGSAMDAQKYQETLHRSSLVKDLELFSYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAQTATNLFTEYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEIIQAAPYHHLLNSSQEFQDLVNAHKETAGSDRLVDVTNSQRHSNSAKEIRKTYVENDNQFEASKGDQLIKQEERESGDQGFKPYIEYLNQNKGYIYFSVASLSHVIFVIGQILQNSWMAANVDNPQVTTLRLILVYLLIGVASTIFLLMRSLFTVAMGLQSSKSLFLQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGFLFAVGATTNCYANLTVLAVVTWQVLFVSIPMIYFAIRLQKYYFASAKELMRMNGTTKSFIANHLAESVAGAVTIRAFEEEDRFFMKNLDLIDVNATPFFHSFAANEWLIQRLETVSAVVLASAALCMVVLPPGTFTSGLIGMALSYGLSLNASLVFSIQNQCNIANYIISVERLNQYMHIPSEASEVIEGNRPPVNWPVAGRVEINELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDREIWEVLGKCQLQEAVQEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFTDCTVITVAHRIPTVMDCTKVLAISDGILVEYDEPMNLMKREGSLFGKLVKEYWSHFQSAESH* 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02632 1481 FunFam ABC transporter C family member 3 1218 1470 - -
Rops6g02632 1481 CDD ABCC_MRP_domain2 1233 1453 - -
Rops6g02632 1481 SMART AAA_5 651 824 IPR003593 GO:0016887
Rops6g02632 1481 SMART AAA_5 1261 1453 IPR003593 GO:0016887
Rops6g02632 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 619 847 IPR027417 -
Rops6g02632 1481 Gene3D ABC transporter type 1, transmembrane domain 883 1217 IPR036640 GO:0005524|GO:0016020
Rops6g02632 1481 Gene3D ABC transporter type 1, transmembrane domain 280 606 IPR036640 GO:0005524|GO:0016020
Rops6g02632 1481 CDD ABC_6TM_ABCC_D1 311 597 IPR044746 GO:0140359
Rops6g02632 1481 Gene3D - 618 853 IPR027417 -
Rops6g02632 1481 FunFam ABC transporter C family member 10 292 605 - -
Rops6g02632 1481 FunFam ABC transporter C family member 10 608 860 - -
Rops6g02632 1481 Pfam ABC transporter transmembrane region 310 574 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops6g02632 1481 Pfam ABC transporter transmembrane region 919 1178 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops6g02632 1481 SUPERFAMILY ABC transporter transmembrane region 921 1215 IPR036640 GO:0005524|GO:0016020
Rops6g02632 1481 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 929 1198 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops6g02632 1481 CDD ABCC_MRP_domain1 624 824 - -
Rops6g02632 1481 Gene3D - 1219 1470 IPR027417 -
Rops6g02632 1481 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Rops6g02632 1481 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016020
Rops6g02632 1481 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1469 - -
Rops6g02632 1481 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Rops6g02632 1481 Pfam ABC transporter 1252 1400 IPR003439 GO:0005524
Rops6g02632 1481 FunFam ABC transporter C family member 5 884 1216 - -
Rops6g02632 1481 CDD ABC_6TM_ABCC_D2 917 1210 IPR044726 GO:0140359
Rops6g02632 1481 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops6g02632 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1237 1469 IPR003439 GO:0005524
Rops6g02632 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 847 IPR003439 GO:0005524
Rops6g02632 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1462 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02632 Rops-Chr6 47216506 47229520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02632 1231 1481 Calmodulin-binding Proteins AT2G36910 29.572 5.78e-28 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02632 K05666 - gmx:100811468 2579.67