Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02631 ATGGCGGGATTTTGGACTGTGTTTTGCGGAGAATTTGGTTGTTCAGAGACTGGAAGAAAGCCTTGCAATTATGATTTTAAGTTGCTCATTGATCCTTCCACCTGTATCAACCACTTGCTGATCTCTTGCTTTGATGTGTTGCTGCTCATCATGCTCTTATTTATGATGATCCAGAAGTCATCATTAAAACCATTCCAGGGTCTAAAACGGGTGCAAAGATATTCAACTTTGCAGCTAGTTTCTGCTATAGCTAATGGTGCACTTGGGTTGGTGCATTTGTTCTTTGGCATTTGGGTTTTAGAGGAGAAGTTGAGGAAAAGCCAAACTGCTTTACCTCTTGACCTGTGGCTGCTAGAATTCTTTCAGGGATTAACATGGTTGTTAGTGGGTTTAACAATAAGTCTCAAGTTGAAACAACTTCCAAGAGCATGGTTTAGGCTTTTTTCTATTCTAATCTTCTTGGTTTCTGGTATTTTCTGTGCTTTCTCCTTGTTCTATGCAATTAGCAGCAGAAAATTGTCTCTCAAGGTAGCTTTAGATGTTCTATCTTTTCCAGGGGCAATATTATTGCTATTATGCACATATAAGGAATCTAAGTACAGGGACACTGACGGAGAAGTTGATGAAAAGCTTTATACCCCTTTAAATGGTGAGTCCAATAAAAATGATTCTATTAGCTATGTATCCCTCTTTGCCAAAGCTGGATTCTTCAGTAGGATGTCATTTTGGTGGCTGAATCCATTGATGAAAAGGGGTAAAGAGAAAACACTTCAGGATGAAGATATCCCAAAGTTGGGGGAGGAAGATAGAGCAGAAAGTTGTTATTTGCTGTTTCTAGACCAATTGTACAAGCAGAAACAGAAGGATCCATCCTCACAACCATCAGTTTTGAAGACAGTAATTTTGTGCCACTGGAGAGAGATTTTGATATCAGGATTCTTTGCATTGCTCAAGGTACTTGCTCTGTCTTCTGGACCTTTGCTTCTGAATTCCTTTATATTAGTTGCTGAGGGTAATGAGAGTTTCAAATATGAAGGTTTTGTATTGGCCATATCACTTTTCTTTATTAAAATCATAGAATCCCTATCACAAAGGCAGTGGTACTTCCGCTGCAGACTTATTGGTCTGAAAGTTAGATCACTGCTAACTGCAGCCATTTATAAAAAGCAATTTAGGTTGTCCAATTCTGCTAGATTGATGCACTCTGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATAGGTGAATTTCCCTATTGGTTTCACCAGACATGGACAACTAGCTTCCAGCTATGTATCTCACTAGTAATACTTTTTCGTGCTGTTGGGCTAGCTACAATTGCCTCCTTGGTGGTGATAGTTATCACAGTGCTTTGCAACACTCCACTTGCAAAGTTACAGCACAAGTTTCAAAGCAAACTTATGGTGGCACAAGATGAGAGATTGAAGGCGAGTTCTGAGGCTCTTGTGAATATGAAGGTGTTGAAGTTGTATGCATGGGAAGCCAATTTTAAAAATGCTATAGAAGCATTAAGGAATGAAGAACTCAAATGGTTGTCTGCAGTGCAATTACGAAAGGCATACAATACCTTTCTCTTTTGGTCCTCACCTGTTTTGGTCTCTGCTGCTACCTTTGGGGCATGTTACTTTCTCGATGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTGGCTACTTTGCGTCTTGTTCAAGATCCAGTTAGAACCATCCCTGATGTTATTGGGGTGGTCATTCAGGCAAAAGTTGCATTTGCCAGGATTGTAAAATTCCTGGAGGCACCTGAACTGCAAGGTGCAAATATCAGGAAGAAGTGTTCTAATGACAATATGAGAGGCTCAATTTCAATCAGGTCTGCTGACTTTTCATGGGAAGATAATGCATCAAAGCCAACATTGAGAAACATAAATTTGGAGGTTAGACCTGGACAAAAGGTGGCTATCTGTGGAGAAGTTGGCTCAGGCAAATCAACTCTCTTATCTGCAATTCTCAGAGAAATTCCTAATACTCAGGGAACGATTGATGTTTATGGCAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAAACAGGTACAATAAGGGAAAATATATTGTTTGGATTAGCTATGGATGCTCAAAAATATCAAGAAACGCTTCAAAGGTCTTCACTATTGAAGGACCTTGAGTTGTTTCCCTATGGTGATCTTACTGAAATTGGAGAGAGAGGGGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCGCGTGCTCTGTATCAGAATCCTGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACAAACTGCCACAAATTTGTTCACTGAATACATCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTGACTCATCAAGTTGATTTCCTTCCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGGGAAATCATACAAGCTGCACCTTATCACCATCTGTTGAACTCAAGCCAAGAATTTCAGGACCTTGTGAATGCTCACAAAGAGACTGCTGGTTCTGACAGGCTTGTGGATGTTACTAATTCTTCCCAGAGACATTCAAATAGTGCTAAAGAGATTAGGAAAACATATGTGGAGAATGAGAAGCAGTTTGAAGCATCAAAAGGAGATCAATTGATTAAGCAAGAGGAGAGAGAAAAAGGAGACCAAGGGTTCAAGCCTTACTTACAGTATTTGAATCAGAGCAAAGGACATATATACTTTTCTGTGGCTTTTCTTTGTCACCTTATCTTTGTGATTAGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAATCCTCAAGTCACCACTTTGAGATTGATTCTAGTTTACTTGTTGATTGGAGTTGCTTCAACATTTATCTTATTGTTTAGAAGTCTTCTTATAGTTGCTATGGGCCTTCAATCATCAAAGTCTATATTTTCACAGCTACTGAACTCCCTTTTTCGTGCTCCCATGTCATTTTATGACTCTACACCTTTGGGACGGATACTTAGTAGGGTCTCCGCTGATCTCAGCATTGTTGATCTTGATATCCCATTTAGCCTATTTTTAGCCGTGGGAGCTACTACGAATTGTTATGCTAATCTTACAGTTTTAGCAGTAGTTACTTGGCAAGTCTTGTTTGTCTCCATACCAATGATTTGTTTTGCAATTCGCTTGCAGAGATATTACTTTGCCACTGCAAAAGAACTGATGCGGATGAATGGCACAACAAAATCCTTCGTAGCTAACCATCTAGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAAGAGGAAGATCGTTTCTTTATGAAAAACCTTGATCTAATTGATGCCAATGCTACTCCTTTCTTCCATAGTTTTGCTGCAAATGAGTGGCTGATTCAACGGTTAGAAACAGTCAGTGCAGTTGTTCTTGCATCTGCAGCACTTTGCATGGTTGTACTTCCACCTGGAACATTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTTCACTTAATGCTTCCTTAGTATTTTCAATTCAACATCAATGCAATATATCAAATTACATAATATCAGTGGAAAGGTTAAATCAATATATGCACATACCAAGTGAGGCCCCAGAAGTAATAGAAGGAAATCGTCCTCCGGTGAATTGGCCAGTAGCTGGTAGAGTAGAAATAAATGAACTGCAGATACGATACAGGTCTGATGCACCACTAGTACTACGTGGGATCACATGCACATTTGAAGCAGGGCACAAAATTGGTATTGTTGGCCGTACAGGTAGTGGCAAGTCCACTCTCATTGGTGCTTTATTCCGTCTTGTGGAGCCAGCTGGTGGAAAAATCATAGTTGATGGCATTGACATTTGTTCCATTGGACTTCATGATTTGAGGTCGCGTTTTGGTATCATACCTCAGGACCCTACTCTTTTCAATGGGACAGTCAGATACAATTTGGACCCGTTATCTCAACACTCTGATCGAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGCTGTTCAAGAGAAAGAAGAGGGTTTAGACTCCTCAGTTGTTGAAGCTGGGGCAAACTGGAGCATGGGACAACGGCAGTTATTCTGTTTGGGACGTGCTCTTCTAAGGAGAAGTCGGATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAATGCTACTGATTTGATTTTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACAGTAATCACAGTAGCTCACAGGATACCAACTGTGATGGATTGCACTAAGGTTCTTGCCATCAGTGATGGAAAACTGGTAGAGTATGATGAGCCGATGAACTTGATGAAGAGAGAAGGATCACTGTTTGGGAAGCTTGTCAAAGAATATTGGTCTCATTTTCAGTCTGCAGAATCTCATTGA 4449 0.4032 MAGFWTVFCGEFGCSETGRKPCNYDFKLLIDPSTCINHLLISCFDVLLLIMLLFMMIQKSSLKPFQGLKRVQRYSTLQLVSAIANGALGLVHLFFGIWVLEEKLRKSQTALPLDLWLLEFFQGLTWLLVGLTISLKLKQLPRAWFRLFSILIFLVSGIFCAFSLFYAISSRKLSLKVALDVLSFPGAILLLLCTYKESKYRDTDGEVDEKLYTPLNGESNKNDSISYVSLFAKAGFFSRMSFWWLNPLMKRGKEKTLQDEDIPKLGEEDRAESCYLLFLDQLYKQKQKDPSSQPSVLKTVILCHWREILISGFFALLKVLALSSGPLLLNSFILVAEGNESFKYEGFVLAISLFFIKIIESLSQRQWYFRCRLIGLKVRSLLTAAIYKKQFRLSNSARLMHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVILFRAVGLATIASLVVIVITVLCNTPLAKLQHKFQSKLMVAQDERLKASSEALVNMKVLKLYAWEANFKNAIEALRNEELKWLSAVQLRKAYNTFLFWSSPVLVSAATFGACYFLDVPLHANNVFTFVATLRLVQDPVRTIPDVIGVVIQAKVAFARIVKFLEAPELQGANIRKKCSNDNMRGSISIRSADFSWEDNASKPTLRNINLEVRPGQKVAICGEVGSGKSTLLSAILREIPNTQGTIDVYGKFAYVSQTAWIQTGTIRENILFGLAMDAQKYQETLQRSSLLKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNPDIYLLDDPFSAVDAQTATNLFTEYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEIIQAAPYHHLLNSSQEFQDLVNAHKETAGSDRLVDVTNSSQRHSNSAKEIRKTYVENEKQFEASKGDQLIKQEEREKGDQGFKPYLQYLNQSKGHIYFSVAFLCHLIFVISQILQNSWMAANVDNPQVTTLRLILVYLLIGVASTFILLFRSLLIVAMGLQSSKSIFSQLLNSLFRAPMSFYDSTPLGRILSRVSADLSIVDLDIPFSLFLAVGATTNCYANLTVLAVVTWQVLFVSIPMICFAIRLQRYYFATAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFMKNLDLIDANATPFFHSFAANEWLIQRLETVSAVVLASAALCMVVLPPGTFTSGFIGMALSYGLSLNASLVFSIQHQCNISNYIISVERLNQYMHIPSEAPEVIEGNRPPVNWPVAGRVEINELQIRYRSDAPLVLRGITCTFEAGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDREIWEVLGKCQLQEAVQEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGKLVKEYWSHFQSAESH* 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02631 1482 FunFam ABC transporter C family member 5 885 1217 - -
Rops6g02631 1482 FunFam ABC transporter C family member 10 606 860 - -
Rops6g02631 1482 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops6g02631 1482 SMART AAA_5 651 824 IPR003593 GO:0016887
Rops6g02631 1482 SMART AAA_5 1262 1454 IPR003593 GO:0016887
Rops6g02631 1482 CDD ABC_6TM_ABCC_D2 922 1211 IPR044726 GO:0140359
Rops6g02631 1482 Gene3D - 599 871 IPR027417 -
Rops6g02631 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 847 IPR003439 GO:0005524
Rops6g02631 1482 Pfam ABC transporter 1253 1401 IPR003439 GO:0005524
Rops6g02631 1482 CDD ABCC_MRP_domain1 624 824 - -
Rops6g02631 1482 FunFam ABC transporter C family member 3 1219 1471 - -
Rops6g02631 1482 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Rops6g02631 1482 FunFam ABC transporter C family member 10 292 605 - -
Rops6g02631 1482 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Rops6g02631 1482 SUPERFAMILY ABC transporter transmembrane region 919 1216 IPR036640 GO:0005524|GO:0016020
Rops6g02631 1482 Gene3D ABC transporter type 1, transmembrane domain 884 1217 IPR036640 GO:0005524|GO:0016020
Rops6g02631 1482 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Rops6g02631 1482 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 924 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops6g02631 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1463 IPR027417 -
Rops6g02631 1482 CDD ABCC_MRP_domain2 1234 1454 - -
Rops6g02631 1482 Gene3D ABC transporter type 1, transmembrane domain 299 598 IPR036640 GO:0005524|GO:0016020
Rops6g02631 1482 Gene3D - 1220 1471 IPR027417 -
Rops6g02631 1482 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1470 - -
Rops6g02631 1482 Pfam ABC transporter transmembrane region 920 1161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops6g02631 1482 Pfam ABC transporter transmembrane region 308 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops6g02631 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1238 1470 IPR003439 GO:0005524
Rops6g02631 1482 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016020
Rops6g02631 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 847 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02631 Rops-Chr6 47167359 47175786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02631 1232 1482 Calmodulin-binding Proteins AT2G36910 29.297 1.18e-27 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02631 K05666 - gmx:100811468 2588.53