Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02623 ATGGATTTAGTTGAAGGTGTGGGAGAGAGTTCCTCACCACCACGCACCTTCAGCGGTTACAACAACTCCGATGTGAGGAACGATGTGTATAATCGCTTAGTGGAAACAGGTCACGACGAAGCCGTTTCGAATCCAGAGTTTCGTGAACAACTTGAAGCTCACTTCAATCGTTTGCCTCCAAGTTATGGACTTGATGTTAATATCGATAGAGCTGAAGATGTTCTATTGCATCAGAGTCTTCTTGCTTTGGCAAAAGACCCAGACAAGCGTCCTGTTTACCATATACGCTTCTTGGAGAATATTTCTACCAGAACAGATGGTGAAGATCAACAAATTGTAAGTACTCACCCTAGCCTAGGGTCATCTTCTCCTTCAACAAACGGTGGAGCTGTGCCATCTCATAAGAGTACGACCAGGGATCTTGCAACAGAGTTTGAGCCTTGCTCGAAGCTTGAGGACCTCAATTTGGATGTTATAAAGAACTCCAAGGGGACAGAGGAAAATTTTCTTGCTGACAACTGCTCCCAGAGGAATGAACATTCAAGTTTCCTACATGAAATAATATTTTCCTCTGTCGACAAGCCAAAGCTTTTAAGCCAGCTGTCCGCTTTGCTCTCTGATATTGGGCTTAACATCCGTGAAGCACATGTTTTTTCCACAACTGATGGCTACTCCCTTGACGTTTTTGTAGTGGATGGATGGCCAGTAGAGGAAACAGATGGTTTATATGATGCTATGGAAAAAGCTGTAGCAAGAAGTGAGGGGTCATGGTCTCGTTCTTCAAATTCGCAATCAGCTGTGGAGAAAGCCTTAGCAGCAGAAGGAAAATCTGGAGATTGGGAAATAGACAGGAGGTTGTTAAAGATAGGAGAAAAAATAGCATCTGGATCTGGTGGAGATTTATATCATGGAATTTATCTTGGTGAAGATGTTGCTGTTAAGGTTCTGAGATTACAGCAACTGAATGATGCCTTAGAGGATGAGTTTGCTCAAGAAGTGGCAATTCTGAGGCAGGTGCATCATAAAAATGTTGTTCGTTTCATTGGTGCATGTACAAAGTGTCCCCATTTGTGCATAGTAACAGAGTATATGCCTGGAGGAAGTCTGTATGATTACTTGCACAAAAATCATAATGTCTTGGAGCTGTCTCAATTACTGAAGTTTGCAATTGATGTCTGCAAGGGTATGGAGTATTTGCATGGAAAGAACATAATTCACAGGGATCTGAAGACAGCCAATTTGCTGATGGATACATACAGTGTTGTTAAAGTGGCAGATTTTGGGGTTGCTCGGTTCCTAAATCAGGGGGGAGTGATGACTGCAGAAACTGGAACATATAGATGGATGGCACCAGAGGTTATAAACCATCAGCCCTATGATCAGAAAGCAGATGTATTCAGTTTTTCCATAGTACTGTGGGAACTAGTGACAGCAAAGGTACCATATGATACCATGACTCCTCTGCAAGCTGCCTTGGGTGTGAGACAGGGACTTCGACCAGAACTTCCAAAGCATGGGCACCCTAAACTGTTAGATTTGATGCAAAGATGTTGGGAAGCAATTCCAAGCAACCGTCCATCCTTTATTGAGATAAGAGTTGAACTTGAAAATCTTTTGCAGGAAATAGAGAATGATTCAGAAGCAAATGGTGCTTGA 1656 0.4263 MDLVEGVGESSSPPRTFSGYNNSDVRNDVYNRLVETGHDEAVSNPEFREQLEAHFNRLPPSYGLDVNIDRAEDVLLHQSLLALAKDPDKRPVYHIRFLENISTRTDGEDQQIVSTHPSLGSSSPSTNGGAVPSHKSTTRDLATEFEPCSKLEDLNLDVIKNSKGTEENFLADNCSQRNEHSSFLHEIIFSSVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEETDGLYDAMEKAVARSEGSWSRSSNSQSAVEKALAAEGKSGDWEIDRRLLKIGEKIASGSGGDLYHGIYLGEDVAVKVLRLQQLNDALEDEFAQEVAILRQVHHKNVVRFIGACTKCPHLCIVTEYMPGGSLYDYLHKNHNVLELSQLLKFAIDVCKGMEYLHGKNIIHRDLKTANLLMDTYSVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEAIPSNRPSFIEIRVELENLLQEIENDSEANGA* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02623 551 Gene3D Transferase(Phosphotransferase) domain 1 365 550 - -
Rops6g02623 551 ProSiteProfiles ACT domain profile. 186 260 IPR002912 -
Rops6g02623 551 ProSiteProfiles Protein kinase domain profile. 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02623 551 MobiDBLite consensus disorder prediction 1 23 - -
Rops6g02623 551 MobiDBLite consensus disorder prediction 106 141 - -
Rops6g02623 551 CDD STKc_MAP3K-like 293 531 - -
Rops6g02623 551 FunFam Serine/threonine-protein kinase isoform 1 277 365 - -
Rops6g02623 551 Pfam Protein tyrosine and serine/threonine kinase 287 534 IPR001245 GO:0004672|GO:0006468
Rops6g02623 551 SUPERFAMILY Protein kinase-like (PK-like) 277 539 IPR011009 -
Rops6g02623 551 SUPERFAMILY ACT-like 185 252 IPR045865 -
Rops6g02623 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Rops6g02623 551 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 136 540 - -
Rops6g02623 551 MobiDBLite consensus disorder prediction 106 138 - -
Rops6g02623 551 Gene3D Phosphorylase Kinase; domain 1 276 364 - -
Rops6g02623 551 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Rops6g02623 551 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Rops6g02623 551 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Rops6g02623 551 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Rops6g02623 551 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Rops6g02623 551 SMART serkin_6 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02623 Rops-Chr6 47007559 47022718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02623 24 545 MAP Kinase Kinase Kinase AT4G35780 48.885 4.53e-174 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops6g02623 PK_Tyr_Ser-Thr 6.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02623 - - gmx:100782737 966.066