Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02614 ATGGAAGCGAACCTCACCGGAGCTTTGGTGGAGACGGAGGAGATGGAGGTTGGGTACCACCACAGGAGGGCATTTTCCGATTACTCATTGCATGTAGAGAATAACTTCAATGACCTGCTCCTCCAACCGTTAGATTTTGATATCACTGACTTTCCTTTCCCTCCTCCTCCGCCACCGCCAGCCACCAGCTGCGGGGGTTCGTCCTCCGGGCCGGTGAAGCAGCATGTCCAGAGCTTGTCCTTGGAGTCCCATCACCTCGACAAGATCGGAATGGCCGGAGCCGGAGCCGACGAGGAGGGTGGCGGACAGAAGGTTGTGGAGTCGCACCGTCATCGGTACAGCAAATCCGTTGATGGGTCCTCGACGGGTTCATCTACTGTGGGGAAGAAGGCCATGACCGCTGAGAAGCTCGCTGAACTTGCTAAGGTCGATCCCAAGAAAGCTAAAAGGATTCTTGCTAACAGGCAATCTGCTGCTAAATCGAAGGAGAGGAAAATGCGTTATGCAATTGAGTTGGAAAAGACGGTGCAGGAGCTTCAGATTGAATCAGATAAAGTCAACGCAAAGGTTAGCACGCTTGAGAAAAGCACTACTGATTTGGCTGCTGAGAACAGGGAGCTCAAAATTCACACAGAGGCCATGAGACAACAAGCAAATGTTAGAAGAGCTCTCAACCAGAAGATGAAGGAAGAAGTGTATTCCCTTAGGATAGAAACTGATCAGTACTCTGCTATCACTGGCATTCCTACTTATGCTTGGCTGCACTATCAATTTTCTTCCCAGTTAACTGTGCAACAGTTTCCTAATCCTCAATTCCAGCATCAGGCCCCTCAGCCACCACAGCTCAGCATGCCTCCTCCCCCTCCCTTTGGTCAGCCTTTCGATGATCATTGTGGCCCAAGCTTCTCGAACTACATTCACCCGAACTAG 930 0.5086 MEANLTGALVETEEMEVGYHHRRAFSDYSLHVENNFNDLLLQPLDFDITDFPFPPPPPPPATSCGGSSSGPVKQHVQSLSLESHHLDKIGMAGAGADEEGGGQKVVESHRHRYSKSVDGSSTGSSTVGKKAMTAEKLAELAKVDPKKAKRILANRQSAAKSKERKMRYAIELEKTVQELQIESDKVNAKVSTLEKSTTDLAAENRELKIHTEAMRQQANVRRALNQKMKEEVYSLRIETDQYSAITGIPTYAWLHYQFSSQLTVQQFPNPQFQHQAPQPPQLSMPPPPPFGQPFDDHCGPSFSNYIHPN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02614 309 Coils Coil 169 196 - -
Rops6g02614 309 SUPERFAMILY Leucine zipper domain 146 200 IPR046347 GO:0003700|GO:0006355
Rops6g02614 309 SMART brlzneu 142 206 IPR004827 GO:0003700|GO:0006355
Rops6g02614 309 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 20 278 - -
Rops6g02614 309 MobiDBLite consensus disorder prediction 273 294 - -
Rops6g02614 309 Pfam Basic region leucine zipper 143 195 IPR004827 GO:0003700|GO:0006355
Rops6g02614 309 MobiDBLite consensus disorder prediction 92 129 - -
Rops6g02614 309 Gene3D - 145 238 - -
Rops6g02614 309 MobiDBLite consensus disorder prediction 51 75 - -
Rops6g02614 309 MobiDBLite consensus disorder prediction 270 309 - -
Rops6g02614 309 CDD bZIP_plant_RF2 147 195 IPR044759 GO:0003700|GO:0006355
Rops6g02614 309 MobiDBLite consensus disorder prediction 102 116 - -
Rops6g02614 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 144 207 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02614 Rops-Chr6 46937654 46939523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02614 98 243 bZIP Transcription Factor Family AT2G40620 53.425 9.25e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops6g02614 bZIP_2 9.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02614 K20557 - gmx:778142 180.259