Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02613 ATGGAATCCAATCATTCATCACTCAACCAAACCAAATTTGTCCATCCAAATGATGACCTTGAGCAACATGCAACTCTAGAGATTGAAAGCAAGGAGGACTTTGATTACTCAAAACGATCCCAATGGCTACGTGCTGCTGTTTTAGGAGCCAATGATGGGTTGGTCTCTACAGCATCTCTGATGATGGGTGTGGGAGCAGTGAAGCAAGACATCAAGGTGATGATCTTATCAGGGTTTGCAGGGCTGGTGGCAGGTGCTTGTAGCATGGCCATAGGGGAGTTTGTGTCTGTGTACTCACAGTTGGAAATAGAAGTTGCTCAATTGAAAAGAGACAAGGAAAGAGGCAATGACACACCAAGAGAAGAGGAAGATAACAAAGAGAAAGAAAACTTACCAAACCCTTTACAAGCAGCAGCAGCCTCAGCTTTAGCATTTTCAGTTGGTGCAATGGTTCCACTGCTTGCAGCCTCTTTTATAAGGGAGTATAAGGTAAGGCTAGGAGTGGTTTTGGGAGCAGTGACCTTTGCTTTGGTGGTCTTTGGTTGGTTGGGAGCAGTGCTGGGTAAGGCTCCAGCTTTCAGGTCTTGTGTAAGGGTCTTGATTGGGGGTTGGCTAGCCATGGCCATAACTTTTGGGTTAACCAAGTTGATTGGGTCAAGTGGGCTTTAA 669 0.4574 MESNHSSLNQTKFVHPNDDLEQHATLEIESKEDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILSGFAGLVAGACSMAIGEFVSVYSQLEIEVAQLKRDKERGNDTPREEEDNKEKENLPNPLQAAAASALAFSVGAMVPLLAASFIREYKVRLGVVLGAVTFALVVFGWLGAVLGKAPAFRSCVRVLIGGWLAMAITFGLTKLIGSSGL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02613 222 CDD Nodulin-21 41 192 - -
Rops6g02613 222 Coils Coil 98 118 - -
Rops6g02613 222 MobiDBLite consensus disorder prediction 109 130 - -
Rops6g02613 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 22 217 IPR008217 GO:0005384|GO:0030026
Rops6g02613 222 MobiDBLite consensus disorder prediction 109 131 - -
Rops6g02613 222 Pfam VIT family 123 214 IPR008217 GO:0005384|GO:0030026
Rops6g02613 222 Pfam VIT family 43 124 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02613 Rops-Chr6 46917902 46918870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02613 1 222 Nodulin-like Gene Family AT3G43660 67.117 3.28e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02613 K22736 - gmx:100815165 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00959 5 18515135 18541754 Rops6g02613 6 46917902 46918870 PCT