Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02607 ATGAACCTTTTCTCAACCTCCACCTCCACCTCTTCTTCCACTGCTTCAGATGAAGACTTAGAAGAGAAATACAGAAAGAAGAGAAAATGGAAGGACTACTTCAGAAGGCTCACAAGGCATGTCTTAGCCAAGCAAGAGGAAATGCAAAAGAAGTTCTTGGAAGCCATAGAAAAACGTGAGAGAGAACATATGGCACAACAAGATGCTTGGAGAATGCAAGAAATAGAAAGGATCAATAGAGAACATGATCTTCTTGTCCAAGAAAGACCAACAGCAACAGCAAAAAATGCAGCAGTTATTGCATTTTTGCAAAAGCTTTCTAGGCAACAAAATCCCACAACACAAATCACAACAGTTGGCAATTTCCTCCCACAACAACAACCACAGCCATCGCCACCACCGGTATCACAACCACAGCTGGTTCCACAACAGCAACTTCCGCATCCACCATTGATACCAAACAACAATAATGAAATCCAGAAAATGAATAATGGTCACAGTACTACTCCATTGAGCTCTTCAAGGTGGCCAAAGGTTGAAGTTCATGCTTTGATAAGGCTAAGAACAAGTCTTGAAGCTAAGTATCAAGAAAATGGACAAAAAGCTCCATTGTGCGAAGATATATCAACAAGTATGCAGAGGCTTGGATACAACATGGGTGTCAAAAGTTGCAAAGAGAAAGTACTTTAG 690 0.4087 MNLFSTSTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRHVLAKQEEMQKKFLEAIEKREREHMAQQDAWRMQEIERINREHDLLVQERPTATAKNAAVIAFLQKLSRQQNPTTQITTVGNFLPQQQPQPSPPPVSQPQLVPQQQLPHPPLIPNNNNEIQKMNNGHSTTPLSSSRWPKVEVHALIRLRTSLEAKYQENGQKAPLCEDISTSMQRLGYNMGVKSCKEKVL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02607 229 MobiDBLite consensus disorder prediction 1 15 - -
Rops6g02607 229 Gene3D - 176 229 - -
Rops6g02607 229 MobiDBLite consensus disorder prediction 1 23 - -
Rops6g02607 229 MobiDBLite consensus disorder prediction 126 149 - -
Rops6g02607 229 MobiDBLite consensus disorder prediction 122 156 - -
Rops6g02607 229 Coils Coil 42 62 - -
Rops6g02607 229 PANTHER FI21293P1 9 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02607 Rops-Chr6 46848354 46849043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02607 172 228 Trihelix Transcription Factor Family AT1G76890 42.105 1.26e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops6g02607 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02607 - - gmx:100799041 265.003