Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02601 ATGGAAGGAAATTTGTCACAGGGAGGTATGATTCAAGGTGGGAGTTCTTTTGGTGGCTTTGATTTACCAGGATCAATTCAGGTTCATCATCAAGCACAGCATCCTCATACCATGCACCAACATCAAACTCATCCACATCAAGGGTCGGTTCATGATGGTTTTCCACTTACAATGGGAACCTTACAGAACTGTGATCAAACCATTTCAATGACCGAGTTTAGTAAGGGAGACAGAAGCAGAAACTCAGCAAGTGAGGAAGATGAGCCAAGCTTTACTGAGGATGGTGTTGATGGTCACCATGAAGCATGTAGAGGTATAAAGGGATCACCTTGGCAACGGGTGAAGTGGACTGATAAGATGGTAAGGCTTCTGATAACAGCTGTTTCTTACATAGGTGAGGATATAACTTCTGATGGTGGTGGCAGTGGAAGAAGGAAATTTGCAGTCCTACAGAAGAAGGGTAAATGGAAATCTGTTTCCAAGGTCATGGCTGAAAGGGGTCATCATGTTTCACCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTAGGGAGGGGCACTTCTTGTCAGGTTGTTGAGAATCCTGCGCTGTTGGATGTAATAGATTATCTTTCTGAGAAGGAAAAGGATGACGTTAGAAAAATATTAAGCTCAAAACACTTGTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGATTGCATTTACCCCATGATCCTGTGTTGCAACGTTCACTGCAGATAGCTCTTCGAAATAGAGATGATCATGATAACGATGATATCAGAAGGTCCCATCATGATGATCATGACGAAGATGAGCAAGATGTGGAAATTGATGAGCATGATGATTTTAAAGAGAATTGTGCTTCTCATGGTGATATATATGGGCCATTAGGTGGATCTATGAAGAAATTGAAACTACCAGGCCAAGGCCAAGAAGATGCTAATACTTTTGGTAATTCTTTAAATTGTCAAGGCTACAACAAAAGTCCTTATCCACATGGACAGATGGTTCAGTCTGATGTTAATCAAGTCATACCTGAAGGCATGAGAGCAGCTTGTTTACAGAAGCAATGGATTGAATCTCGCTCTCTTCAGTTAGAAGAGCAGAAGCTACAAATTCAGGTTGAGATGTTGGAACTAGAGAAACAGAGATTCAAGTGGCAGAGGTTCAGTAAGAAAAAGGACCGGGAGTTGGAGAAGATGAGTCTAGAAAATGAAAGAATGAGGCTTGAAAATGAACGTATTGCTTTAGAACTGAAACGAAAGGAAATGGGCCCTGGCTTTAACTAG 1326 0.4057 MEGNLSQGGMIQGGSSFGGFDLPGSIQVHHQAQHPHTMHQHQTHPHQGSVHDGFPLTMGTLQNCDQTISMTEFSKGDRSRNSASEEDEPSFTEDGVDGHHEACRGIKGSPWQRVKWTDKMVRLLITAVSYIGEDITSDGGGSGRRKFAVLQKKGKWKSVSKVMAERGHHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPVLQRSLQIALRNRDDHDNDDIRRSHHDDHDEDEQDVEIDEHDDFKENCASHGDIYGPLGGSMKKLKLPGQGQEDANTFGNSLNCQGYNKSPYPHGQMVQSDVNQVIPEGMRAACLQKQWIESRSLQLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKMSLENERMRLENERIALELKRKEMGPGFN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02601 441 MobiDBLite consensus disorder prediction 78 102 - -
Rops6g02601 441 MobiDBLite consensus disorder prediction 1 58 - -
Rops6g02601 441 Pfam Myb/SANT-like DNA-binding domain 113 239 IPR044822 -
Rops6g02601 441 PANTHER F16F4.11 PROTEIN-RELATED 1 437 - -
Rops6g02601 441 Coils Coil 403 435 - -
Rops6g02601 441 Coils Coil 373 395 - -
Rops6g02601 441 MobiDBLite consensus disorder prediction 263 288 - -
Rops6g02601 441 Gene3D - 116 188 - -
Rops6g02601 441 MobiDBLite consensus disorder prediction 263 282 - -
Rops6g02601 441 MobiDBLite consensus disorder prediction 72 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02601 Rops-Chr6 46759505 46765692 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops6g02601 Myb_DNA-bind_4 1.8e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02601 - - gmx:100812134 723.391