LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops6g02585	ATGGCGTCGTCGAAGCTGATGGCGTCTTCCAATTCCAGAAAATCGGATCCTTCTTCCAATCCCCAACTAACCACCACCAACTTCATGCCCATTTCCGACCACTCCGCCGCCGCCGCAGCTCCCAAAACCGTCGACGACGTCTGGCGGGAGATCGTCGCCGGCGAACGCAGGGAGTGCAAGGAGGAGGTCCCCGACGAGATGATGACACTCGAGGATTTCCTCGTCAAGGCCGGCGCCGTCGATGACGATGACGACGAGATCAAGATGCCGGTGCCCCTCACCGAGAGGCTGAGTAGCGGCGGAGGGATGTTTGCACTCGATCCTCCTCCGTTTCAGGGGTTGGAGAGTGTTGAAGGGTCGGTTATAGGGTTTGGAAATGGAGTGGAAGTGATTGAAGGAGGACGGGGGAGAGGGAAGAGGGGACGCCCCGTTTTGGAGCAATTGGATAAAGCTGCTCAACAGAGACAGAGGAGGATGATCAAGAACAGAGAATCTGCTGCCAGGTCTAGGGAACGCAAGCAGGCTTATCAAGTTGAATTGGAGTCCTTGGCAGTGAAACTAGAGGAGGAAAATGACAAGTTGTTGAAGGAAAAGGCTGAGAGGAAAAAGGAGAGGTTCAAGCAGCTAATGGAAAAAGTGATCCCTGTTGTGGAGCAGCGAAGGCCACCACGTTTACTCCGTAGGATTCGCTCCTTGGAGTGGTAG	705	0.5475	MASSKLMASSNSRKSDPSSNPQLTTTNFMPISDHSAAAAAPKTVDDVWREIVAGERRECKEEVPDEMMTLEDFLVKAGAVDDDDDEIKMPVPLTERLSSGGGMFALDPPPFQGLESVEGSVIGFGNGVEVIEGGRGRGKRGRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERFKQLMEKVIPVVEQRRPPRLLRRIRSLEW*	235

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops6g02585	234	FunFam	ABSCISIC ACID-INSENSITIVE 5-like protein 2	152	213	-	-
	Rops6g02585	234	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	157	172	IPR004827	GO:0003700\|GO:0006355
	Rops6g02585	234	Coils	Coil	173	212	-	-
	Rops6g02585	234	Pfam	bZIP transcription factor	152	208	IPR004827	GO:0003700\|GO:0006355
	Rops6g02585	234	MobiDBLite	consensus disorder prediction	1	32	-	-
	Rops6g02585	234	CDD	bZIP_plant_BZIP46	154	200	-	-
	Rops6g02585	234	SMART	brlzneu	150	212	IPR004827	GO:0003700\|GO:0006355
	Rops6g02585	234	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	37	209	IPR043452	GO:0003700\|GO:0045893
	Rops6g02585	234	MobiDBLite	consensus disorder prediction	1	41	-	-
	Rops6g02585	234	Gene3D	-	152	201	-	-
	Rops6g02585	234	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	152	204	IPR004827	GO:0003700\|GO:0006355
	Rops6g02585	234	SUPERFAMILY	Leucine zipper domain	154	205	IPR046347	GO:0003700\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops6g02585	3	234	bZIP Transcription Factor Family	AT5G44080	52.846	1.08e-72	222

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Rops6g02585		bZIP_1	2.6e-12	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops6g02585	K14432		-	gmx:100808917	260.381