Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02573 ATGATCATGACTTCTGCTTCTTGTAGGAGTGTTTTTTTCACCTTTCTTGTGATCTCTATCTTTCTTTTGGTTTCCCACATCAAAGTGTCTGAAGCACAAGGCAAGCCTCCTATAGTGAAGGGACTATCATGGACCTTCTATGATTCACGCTGCCCTGACCTTGAATCTGTCATCAGAACACAGCTCAAGAAGGTTTTCAAGGAGGACATAGGTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGGTTGTGATGGGTCAGTCTTATTGGATGGATCAGCAAGTGGGCCAAGTGAGAAAGATGCACCCCCAAACTTGACTTTGAGGGCTGAGGCCTTTAAAATCATCGAAGACCTTCGACGTAGAGTAGAGAAGAAATGTGGAAGAGTTGTCTCTTGTTCTGACATAACTGCCCTTGCCGCGCGTGATGCTGTTTTCCTCTCAGGAGGACCAGACTATGAAATTCCATTGGGAAGGAGAGATGGGTTAACCTTTGCCACAAGAAATGTGACATTGGCAAACCTTCCAGCTCCTTCAAGCAACACAACCACCATCCTAAACTCTCTTGCCACAAAAAACCTTGACCCCACTGATGTTGTAGCCCTCTCAGGTGGCCACACCGTAGGAATCAGTCACTGCAGATCTTTCACCAACAGGCTCTACCCTGCTCAAGACCCTGTCATGGACAAAACCTTTGGGAAAAACCTCAAACTCACTTGCCCCACTAACACCACAGACAACACCACAGTGTTGGACATTCGATCCCCTAATGCGTTCGATAACAAGTACTACGTTGACCTCATGAACCGCCAGGGTCTCTTTACCTCTGATCAAGACTTGTACACTGATAAGAGGACAAAGGACATTGTTACCAGCTTTGCTGTGAACCAGACTCTGTTCTTTGACAAGTTTGTGGCTGCTATGCTGAAAATGGGTCAGCTTAGTGTGTTGACTGGAACTCAAGGGGAGATTCGTGCCAATTGCTCTGTGAGGAATACGGATAACAAATCCTTCTTGACTTCTGTGGTGGAAGATGTGGTGGAAGGTTTCATAGAAATGTAA 1077 0.4624 MIMTSASCRSVFFTFLVISIFLLVSHIKVSEAQGKPPIVKGLSWTFYDSRCPDLESVIRTQLKKVFKEDIGQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEKDAPPNLTLRAEAFKIIEDLRRRVEKKCGRVVSCSDITALAARDAVFLSGGPDYEIPLGRRDGLTFATRNVTLANLPAPSSNTTTILNSLATKNLDPTDVVALSGGHTVGISHCRSFTNRLYPAQDPVMDKTFGKNLKLTCPTNTTDNTTVLDIRSPNAFDNKYYVDLMNRQGLFTSDQDLYTDKRTKDIVTSFAVNQTLFFDKFVAAMLKMGQLSVLTGTQGEIRANCSVRNTDNKSFLTSVVEDVVEGFIEM* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02573 358 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Rops6g02573 358 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Rops6g02573 358 CDD secretory_peroxidase 41 335 IPR033905 GO:0004601|GO:0042744
Rops6g02573 358 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 FunFam Peroxidase 45 193 - -
Rops6g02573 358 SUPERFAMILY Heme-dependent peroxidases 37 339 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 Gene3D - 45 334 - -
Rops6g02573 358 FunFam Peroxidase 181 316 - -
Rops6g02573 358 Gene3D Peroxidase, domain 2 182 317 - -
Rops6g02573 358 PANTHER PEROXIDASE 25-RELATED 20 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 Pfam Peroxidase 59 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02573 358 ProSiteProfiles Plant heme peroxidase family profile. 41 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02573 Rops-Chr6 46349574 46353525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02573 3 358 Peroxidase AT1G71695 61.667 4.81e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02573 K00430 - gmx:100775837 572.778