Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02570 ATGGGTTGTGTTCAGGCTAAGCCATTGGAAGATAGTCCACACTACAGTGGCCTAGAAAAGTTAAAATTGGAAAGTGGGTATGTTGCAAGTTCCGACTTTGTTGCCCACAGGAGATCCACTGGTCAGAGACACGAGTCTAGGGAGTCTGGTATGCAGCATCAGAGAGAACCCAGAAAGCATAAAGTTGAGTATGGTGTTGGCAATGCTGAAAGGCAAGGACTTGCTAAAGGTAGAGAGAGGAGGAGACATGCTGCTGATGTACTTGATCATACTAAGAAGCTGAAAAACGAGTGTGTTGAGGATGAGAATGAGACGGTTGATGGGTGGCCCAGATGGTTAGTTGATAATGTTCCTACACAAGTGTTAGCTGGCTTGGTCCCCAAAAGCGCTGAATCTTACAAAATGATTGATAAGGTAGGACAAGGAACCTATAGCAATGTTTATAAAGCTCTAGATCGAGACACAGGAGAAATTGTGGCCCTCAAGAAGGTCCGCTTCAATACATCAGAGCCTGAAAGCATTAAATTTATGGCAAGAGAAATTATGATATTGCAGAGATTGGATCATCCCAACGTAGTAAAACTTAAAGGAGTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGACTTCATGCAAACAGATTTGGCAAGAGTTATTGCTCGCCCCGATGAGAGACTAACTGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGATAGGGGAATTTTGCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAAATGGGATGCTTAAGATTGCAGATTTTGGGCTTGCCAATTATTACAGTCCAAATCATTACCAGCCTCTCACAAACCGGGTTGTGACACTATGGTATAGAGCTCCTGAGTTGTTGTTAGGTTCCACAGATTATGGAGTTGGTATTGATCTATGGAGTGCTGGATGTCTCCTGGCAGAAATGTTTAAAGGAATTCCAATCATGCCTGGAAGAACAGAGGTTGAGCAACTTCATAGAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTAAATTTATCTATAACTTTTAGACCTCCAAAGTCTTATAGACCCAGCCTTGTAGAAACTTTCGGGGATCTCCCTCCATCTTCTTTAGGTCTTTTATGTACTCTTCTTGCTTTGGATCCTGCATTCCGTGGCAGTGCATCTAAAGCTCTTGAAAATCAGTTTTTCTTTACAAGCCCGTTGGCGTGTGATCTCTCTGGTCTGCCTGCAATCTACAACGAAGATGATGAGCTTATTCAAGCCAAAGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGTACATATCTGGAGCGTCGCAAAAATGTTGCATCTAATAGGCCAATAGAACATACTGTATCGTCTAAAGAGGAACTGAGAAGGAATGCTGACTATGAAACTTATGTTCCAAATGATGAACTGGATAGCCCAACAAGTAGCACCTCATCTAGTGTAAACCCAGCTGGGGCTAAGGACCACTCACCTTTCCTTGTCTCTCCATTTCTGGCTTCAGATCAAAAGCTGCCCCAAAAAATCCATCACCGTGCTAATGTTGGTATGAAAAACATCAAGAACCTTCCTCCATTATCCAAGTCAAAACCAAATGCAACCAAGAAAGATGACAGCAGATACAGAACAGCCCATGTTCTTAGGTCTTCTTCCACAAGAGAATTTAGAAACTTAAAACGGGAGGAACATTTACTCTTTGAAATTGATGATTAG 1785 0.4185 MGCVQAKPLEDSPHYSGLEKLKLESGYVASSDFVAHRRSTGQRHESRESGMQHQREPRKHKVEYGVGNAERQGLAKGRERRRHAADVLDHTKKLKNECVEDENETVDGWPRWLVDNVPTQVLAGLVPKSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREIMILQRLDHPNVVKLKGVATSRMQYSIYLVFDFMQTDLARVIARPDERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANYYSPNHYQPLTNRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFKGIPIMPGRTEVEQLHRIFRLCGTPSEEYWRKLNLSITFRPPKSYRPSLVETFGDLPPSSLGLLCTLLALDPAFRGSASKALENQFFFTSPLACDLSGLPAIYNEDDELIQAKEQIKYMNSKIRRSRTYLERRKNVASNRPIEHTVSSKEELRRNADYETYVPNDELDSPTSSTSSSVNPAGAKDHSPFLVSPFLASDQKLPQKIHHRANVGMKNIKNLPPLSKSKPNATKKDDSRYRTAHVLRSSSTREFRNLKREEHLLFEIDD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02570 594 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Rops6g02570 594 MobiDBLite consensus disorder prediction 463 489 - -
Rops6g02570 594 FunFam Putative serine/threonine-protein kinase 216 453 - -
Rops6g02570 594 Gene3D Transferase(Phosphotransferase) domain 1 216 453 - -
Rops6g02570 594 FunFam probable serine/threonine-protein kinase At1g54610 120 215 - -
Rops6g02570 594 MobiDBLite consensus disorder prediction 37 61 - -
Rops6g02570 594 Pfam Protein kinase domain 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02570 594 MobiDBLite consensus disorder prediction 538 566 - -
Rops6g02570 594 PANTHER CELL DIVISION PROTEIN KINASE 131 420 - -
Rops6g02570 594 Gene3D Phosphorylase Kinase; domain 1 125 215 - -
Rops6g02570 594 ProSiteProfiles Protein kinase domain profile. 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02570 594 MobiDBLite consensus disorder prediction 33 61 - -
Rops6g02570 594 SMART serkin_6 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02570 594 MobiDBLite consensus disorder prediction 463 511 - -
Rops6g02570 594 SUPERFAMILY Protein kinase-like (PK-like) 128 419 IPR011009 -
Rops6g02570 594 MobiDBLite consensus disorder prediction 493 510 - -
Rops6g02570 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02570 Rops-Chr6 46329030 46337615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02570 128 450 Core Cell Cycle Gene Families AT5G10270 45.455 7.12e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Rops6g02570 Pkinase 1.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02570 K08819 - gmx:100776854 905.59