Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02562 ATGAGCTCCAAAACTCCCCATACTGATGATTCCATTGATGCATTGAAGTTTAAAATGCCTGCTCAAAAGGATCCAGATAAGTTCTTCATGTCCATCACTGAAGGAGAGAAAAAGCCATTTGACTTTTTGCGTGTTCTTTATGATGGTTGCATTGCTGGAGGTGTTGCTGGCGTTGCTGTAGAAGCAGCTTTATACCCCATTGATACCATCAAAACTCGACTACAGGTTGCTCGTGGTGGAGGGAAAATTATTTTGAAGGGTCTGTATTCTGGATTGGCCGGAAATCTTGCTGGTGTCTTACCAGCTTCTGCAATTTTTATTGGCGTGTATGAACCCACAAAGCAGATATTGCTAAAGTCCTTGCCTGAGAATCTAAGTGCTGTGGCTCATGTTGCCGCAGGTGTAATTGGAGGCACCGCTTCTTCTCTTGTTCGTGTTCCAACTGAAGTTGTTAAGCAAAGGATGCAAACCGGGCAATTTAGATCAGCCCCGTCTGCTGTCCGTCTTATTATTGCTAATGAGGGTTTCAAAGGTCTTTATGCGGGATATGGATCTTTCTTATTGCGAGATTTACCATTTGATGCTATAGAATTATGCATCTATGAGCAGCTCCGCATCGGGTATAAACTAGCGGCAAAAAGAGATCTAAATGATCCAGAGAATGCTATGATTGGGGCAGTTGCTGGTGCCATAACTGGAGCAGTTACAACTCCTCTTGATGTAATAAAAACGAGATTGATGGTTCAGGGATCACAAAAACATTACAAAGGCATTCATGATTGCGTGAGGACAATAATTAAAGAAGAAGGAACTCATGCTCTTTTTAAGGGTATTGGGCCAAGAGTTTTGTGGATAGGAATTGGAGGTTCAATATTTTTTGGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCGGAGACACCCTCAAGCTGAATCTAAGAAAAAATGA 948 0.4188 MSSKTPHTDDSIDALKFKMPAQKDPDKFFMSITEGEKKPFDFLRVLYDGCIAGGVAGVAVEAALYPIDTIKTRLQVARGGGKIILKGLYSGLAGNLAGVLPASAIFIGVYEPTKQILLKSLPENLSAVAHVAAGVIGGTASSLVRVPTEVVKQRMQTGQFRSAPSAVRLIIANEGFKGLYAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDLNDPENAMIGAVAGAITGAVTTPLDVIKTRLMVQGSQKHYKGIHDCVRTIIKEEGTHALFKGIGPRVLWIGIGGSIFFGVLEKTKQILARRHPQAESKKK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02562 315 Gene3D Mitochondrial carrier domain 47 315 IPR023395 -
Rops6g02562 315 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 34 312 - -
Rops6g02562 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 116 IPR018108 -
Rops6g02562 315 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 48 315 - -
Rops6g02562 315 PRINTS Mitochondrial carrier protein signature 225 247 IPR002067 GO:0055085
Rops6g02562 315 PRINTS Mitochondrial carrier protein signature 62 76 IPR002067 GO:0055085
Rops6g02562 315 PRINTS Mitochondrial carrier protein signature 49 62 IPR002067 GO:0055085
Rops6g02562 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 302 IPR018108 -
Rops6g02562 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 207 IPR018108 -
Rops6g02562 315 Pfam Mitochondrial carrier protein 220 305 IPR018108 -
Rops6g02562 315 Pfam Mitochondrial carrier protein 49 120 IPR018108 -
Rops6g02562 315 Pfam Mitochondrial carrier protein 125 205 IPR018108 -
Rops6g02562 315 SUPERFAMILY Mitochondrial carrier 50 297 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02562 Rops-Chr6 46188688 46196919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02562 20 303 Chloroplast and Mitochondria Gene Families AT2G30160 29.808 2.95e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02562 K15111 - gmx:100800051 482.641