Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02555 ATGAACATAACAGAGAAGAGTGATGTCTACAGTTATGGAGTGGTTTTGCTAGAGATATTAAGTGGGCGTAGTGCAGTTGAATCCCATGTGGGAGATGGACAACACATAGTTGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCTGTATCAATACTAGATACAAAGCTCCAAGGTCTACCAGATCAAATGGTTCAAGAGATGCTTCAAACACTTGGGATTGCTATGTTTTGTGTGAACTCTTCCCCAGCAGAACGCCCCACAATGAAGGAAGTGATTGCATTGCTAATGGAGGTGAAAAGCCAGCCTGAGGAGATGATGGGGAAGACCTCTCAACCTCTAATAAAGCAGTCCTCAACTCAAAGTTGA 372 0.4409 MNITEKSDVYSYGVVLLEILSGRSAVESHVGDGQHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVIALLMEVKSQPEEMMGKTSQPLIKQSSTQS* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02555 123 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02555 123 MobiDBLite consensus disorder prediction 106 123 - -
Rops6g02555 123 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Rops6g02555 123 Pfam Protein tyrosine and serine/threonine kinase 2 96 IPR001245 GO:0004672|GO:0006468
Rops6g02555 123 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 102 - -
Rops6g02555 123 MobiDBLite consensus disorder prediction 104 123 - -
Rops6g02555 123 SUPERFAMILY Protein kinase-like (PK-like) 3 108 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02555 Rops-Chr6 46067839 46072137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02555 3 101 Receptor kinase-like Gene Family AT4G26540 46.465 1.09e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops6g02555 PK_Tyr_Ser-Thr 3.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02555 - - gmx:100819611 232.261