Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02533 ATGGGGTTCCCTTCGATATCCTTAGACAGTAGCTGGTGGGTGTTAACTCTTCCAGCTATAGCAGGAACACAAAACTTGCTTAACAATATGGTCTTGCTAATCCTAATTGCACTTCTCACCATTGGGTTTCTCACTTGGGCTTTCCCAAGAGGAGGAGGTGTAGCTTGGAGAAATGGAAGGAATCAAATGGGTAAGGTCCCTATACCAGGACCTAAAGGTTTCCCAATCTTTGGAATCTTATTCAGCTTGAAACATGGTCAACCTCACCGTACCCTTGCTTCCATGGCTTCAACTCTCTCTGCTAAAAAACTCATGGCCTTCAGTTTAGGCTCAACCCCTGCAGTTATCACCTCAAACCCTCACATAGCACGAGAAATCTTGAACTCACCTCATTTTGCAGATCGTCCCATTAAGCAATCTGCTAGAAGCCTCATGTTTAACCGTGCCATTGGTTTTGCACCAAACGGTGTGTATTGGCGTTTGCTTCGTAGGGTTGCTTCAACCCACCTTTTCTCTCCTAGGCTCATCGCTGCCCATGAAGCCGATCGCCGGCGTGGCTGCGCCGCCATGTTGGGTGCCATATCTCATGAACAATCCAAATGTGGATTTGTTTGCCTGAGGAAACATCTCCAAGATGCAGCTCTTGATAACGTTATGGGCACTGTATTCGGGAGAAGGTATAACCAAGAAGAGTCTCATAATAGCTATGAGGTTAAAAAGCTTAATGAGATGGTGAGAGAAGGGTTTGAGCTTTTAGGAGCTTTCAATTGGTCTGATTATGTCTCTTGGATATGCTTCTTTTATGACCCTTTTCGTGTTCGAGAACGTTGTTCTGTTCTTGCTCCTCGTGTTAAGAAATTTGTAAAGAAGATTTTGGATGAGCACCGAATGGCTCCATGCAAGGAACTTTCTGATGGCTCTGACTTTGTGGATGTTCTGCTATCTCTTGAGGGAGATGAGAAGCTCCAAGACGACGACATGATTGCCATTTTATGGGAGATGATATTTCGTGGCACGGATACAATAGCACTTCTTACTGAGTGGGTAATGGCTGAGCTTGTTTTGAACCAACAAATCCAGAAAAGGCTACGTGACGAGATTGACAGTGTTGTGGGAGACAAAAATGATGTCACAGATGCTGATGTGATCAAATTGCCATACCTTGAAGCCATTGTGAAGGAGACATTACGACTTCATCCAATTGGGCCACTCCTCTCATGGGCCCGTTTGTCCACGTCAGATGTCCAGCTCAGCAATGGGATGGTGGTCCCAGCCAACACCACAACAATGGTGAATATGTGGGCCATAACCCACAACCCCGATGTTTGGGAGGACCCTTTGGTGTTCAAGCCAGAGAGGTTTGTGAAGAGTGAAGGAGGGGTTGAAGTTGATGTGAGAGGAGTTGACCTAAGGCTTGCACCATTTGGAGCTGGACGTAGGGTTTGCCCAGGTCGGAACCTAGGTCTTGTGACCGTGAGCCTTTGGGTGGCTAGGTTGGTTCACCAGTTTCAATGGTTCCAAGACATGGCTAACCCAGTTGACCTAACCGAAGTGCTCAAGCTATCTTGTGAGATGAAGAACCCCCTCAAAGCTGTTGCAATTCCTAGGGTTGCTTAA 1617 0.4651 MGFPSISLDSSWWVLTLPAIAGTQNLLNNMVLLILIALLTIGFLTWAFPRGGGVAWRNGRNQMGKVPIPGPKGFPIFGILFSLKHGQPHRTLASMASTLSAKKLMAFSLGSTPAVITSNPHIAREILNSPHFADRPIKQSARSLMFNRAIGFAPNGVYWRLLRRVASTHLFSPRLIAAHEADRRRGCAAMLGAISHEQSKCGFVCLRKHLQDAALDNVMGTVFGRRYNQEESHNSYEVKKLNEMVREGFELLGAFNWSDYVSWICFFYDPFRVRERCSVLAPRVKKFVKKILDEHRMAPCKELSDGSDFVDVLLSLEGDEKLQDDDMIAILWEMIFRGTDTIALLTEWVMAELVLNQQIQKRLRDEIDSVVGDKNDVTDADVIKLPYLEAIVKETLRLHPIGPLLSWARLSTSDVQLSNGMVVPANTTTMVNMWAITHNPDVWEDPLVFKPERFVKSEGGVEVDVRGVDLRLAPFGAGRRVCPGRNLGLVTVSLWVARLVHQFQWFQDMANPVDLTEVLKLSCEMKNPLKAVAIPRVA* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02533 538 CDD CYP78 100 529 - -
Rops6g02533 538 Pfam Cytochrome P450 69 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 SUPERFAMILY Cytochrome P450 68 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Rops6g02533 538 Gene3D Cytochrome P450 60 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PANTHER CYTOCHROME P450 78A7-RELATED 10 536 - -
Rops6g02533 538 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02533 538 FunFam Cytochrome P450 78A5 60 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02533 Rops-Chr6 45869550 45871816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02533 7 532 Cytochrome P450 AT5G09970 64.286 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02533 K20619 - pvy:116124806 747.658