Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02521 ATGATGTTCCAACCACAACAACATCCTCTGTTACTGTCCCTTTTCATCTTCACCACTGTCATCTCCGCCATTTTTGGAACCACCACCATCTTACCAGGCACAACCCTCTACGCTTCTAACACAAACCAATCATGGTCTTCTACCAACAACACTTTCTCTCTTCGTTTCCTTCCCCTTCACCCTCAAACTTCCCCTCCTTCCTTCATCGCCGCCGTTATATTCTCCGGCGGATCACCCGTCATATGGTCCACCGGGAACTCCGTCGTGGACTCCGGCGGATCACTCCGGTTCCTCTCCGACGGAAACCTCCGCCTTGTTAATGGGTCGGGCTCCACCGTGTGGGATTCTGGAACTTCCCACAAGGGTGTCACTTCTGCCATGCTTCATGACAGTGGAAACTTGGTTCTCTCCAATGGCACTGGCTCTGTGTGGTCAAGTCTTGACAACCCCACTGATACAATTGTGCCGTCTCAAAATTTCACTCTTGGTAAGGTTTTGCGTTCTGGGTTGTTCTCCTTTTCTGTTCTTAGATCCGGGAACCTCACACTCAAATGGAGTGATAGTGTGCCTTATTGGGATCAAGGCTTCAGCTCTTCCATGAGTGTGGTTAATTTGAGTTCACCTGTTTTGAGGTTGAAATCAGAGGGAATTTTGCAGCTTTTTGATCCAAATTTGACTTCCCCTTTGGTGGTTGCTTATAGCAATGACTATGCTGAAGGGAATGATGTGTTGAGGATTTTGAAGCTGGATGGTGATGGGAATTTGAGGATTTATAGCTCTAAAAGAGGTAGTGGGACTGTGACTGTGACATGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTACTGTGGGAACAATGGTATTTGTAGTTATAATGATTCCAACCCAATTTGTGGATGTCCATCTCAGAATTTTGAGATGGTTGATCCTAAAGACAGTAGGAAAGGGTGCAAGAGGAAGGTGAGGCTTGAGGATTGTGTAGGGAAGGTGACTATGTTGCAAGTGGACCATGCTAGATTCTTGACATATCCTCCTCTGTTTTTGATTAATCCTGAGATATTTTTCATTGGTATATCAGCTTGCCGTGGAAATTGTCTTGCGGCCAGTTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGAACTGGACTGTGTTACATAAAGACAACTAATTTTATTAGTGGCTACCAGAATCCTTCTCTACCAAGCACTTCTTATATCAAGGTTTGTGGACCATTGGCTCCAAACTTAAAACCTTCCTTGGAGAATGCTGGTGAGGGGAAGGATAGGAAGATACATGCTTGGGTAGTAGCTTTAGTTGTTTTTAGTACCCTTTTAGGTTTCCTTGCCTTTGAGGGTGGTTTATGGTTGTGGTGCTGTAGAAACAGCCCAAGATTGGGAGGATTTGCTGCTCATTATGCTCTTCTTGAGTATGCTTCTGGTGCACCAGTCCATTTCTCTTACAAGGAGCTCCAAAGGTCAACAAAGGGATTCAAGGAGAAACTTGGTGATGGGGGATTTGGAGCTGTTTATAAAGGAATTATTGCTAATCAAACTGTTGTTGCAGTTAAGCAACTCGAGGGCATTGAGCAAGGGGAGAAACAGTTTAGGATGGAAGTTTCTACCATAAGTAGTACTCATCATCTGAATTTAGTGAGGCTGATTGGTTTTTGCTCTGAAGGGCGTCACAGGCTTTTAGTATACGAGTTCATGAAAAATGGATCTCTTGATAACTTTCTTTTTGTTAATAGAGAACAATCAGGAAAAGTGTTGAATTGGGGGTATCGATTCAACATTGCCTTGGGTGCTGCTAGGGGCTTGACATACCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTAAAACCTGAAAACATTCTTTTAGATGAGAATTACAATGCAAAAGTCTCAGATTTTGGCCTTGCAAAGCTCTTAAGTCCAACGGATCACAGGCACCTAACCTTGACAAGTGTGAGAGGAACCAGAGGGTATTTAGCTCCTGAATGGCTTGCAAATCTTCCCATAACTTCCAAATCTGATGTTTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAGAAGAAACAGATAGAAAAAAGTTTTCTATCTGGGCTTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTAATTGATAGAAGATTGGTTAGTCAAGAAGTAAACTTGGAGCAAGCAAGAAGAATGCTTCTGGCATGTTTTTGGTGCATACAAGAACAGCCATCTCAGAGGCCAACAATGAGCAAAGTTGTGCAAATATTAGAAGGTGTGACAGATATTGAAAGGCCACCAGCCCCAAAATCCATTTCAGTAGGATCTTCTTGTGTAATCAGTAGCAATGCCACTGCTATCTCCACTATTGCAACCTCATCAACTCCAACTTGCTCCCCATCTTCATCTTTGTTGACTTGA 2460 0.4317 MMFQPQQHPLLLSLFIFTTVISAIFGTTTILPGTTLYASNTNQSWSSTNNTFSLRFLPLHPQTSPPSFIAAVIFSGGSPVIWSTGNSVVDSGGSLRFLSDGNLRLVNGSGSTVWDSGTSHKGVTSAMLHDSGNLVLSNGTGSVWSSLDNPTDTIVPSQNFTLGKVLRSGLFSFSVLRSGNLTLKWSDSVPYWDQGFSSSMSVVNLSSPVLRLKSEGILQLFDPNLTSPLVVAYSNDYAEGNDVLRILKLDGDGNLRIYSSKRGSGTVTVTWVAVEDQCEVFGYCGNNGICSYNDSNPICGCPSQNFEMVDPKDSRKGCKRKVRLEDCVGKVTMLQVDHARFLTYPPLFLINPEIFFIGISACRGNCLAASSCFASTSLSDGTGLCYIKTTNFISGYQNPSLPSTSYIKVCGPLAPNLKPSLENAGEGKDRKIHAWVVALVVFSTLLGFLAFEGGLWLWCCRNSPRLGGFAAHYALLEYASGAPVHFSYKELQRSTKGFKEKLGDGGFGAVYKGIIANQTVVAVKQLEGIEQGEKQFRMEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFVNREQSGKVLNWGYRFNIALGAARGLTYLHEECRNCIVHCDVKPENILLDENYNAKVSDFGLAKLLSPTDHRHLTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEISEETDRKKFSIWAYEEFEKGNIMGVIDRRLVSQEVNLEQARRMLLACFWCIQEQPSQRPTMSKVVQILEGVTDIERPPAPKSISVGSSCVISSNATAISTIATSSTPTCSPSSSLLT* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02521 819 SUPERFAMILY Protein kinase-like (PK-like) 479 771 IPR011009 -
Rops6g02521 819 CDD B_lectin 39 150 IPR001480 -
Rops6g02521 819 PIRSF SRK 2 816 IPR024171 GO:0004674
Rops6g02521 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 195 IPR036426 -
Rops6g02521 819 PANTHER OS07G0415500 PROTEIN 13 782 - -
Rops6g02521 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 149 - -
Rops6g02521 819 SMART serkin_6 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02521 819 Gene3D Phosphorylase Kinase; domain 1 471 570 - -
Rops6g02521 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Rops6g02521 819 FunFam S-receptor-like serine/threonine-protein kinase 471 570 - -
Rops6g02521 819 CDD STKc_IRAK 502 772 - -
Rops6g02521 819 SMART blect_4 36 150 IPR001480 -
Rops6g02521 819 Pfam Protein kinase domain 499 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02521 819 ProSiteProfiles Bulb-type lectin domain profile. 151 270 IPR001480 -
Rops6g02521 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 571 780 - -
Rops6g02521 819 Pfam S-locus glycoprotein domain 239 302 IPR000858 GO:0048544
Rops6g02521 819 Gene3D Transferase(Phosphotransferase) domain 1 571 781 - -
Rops6g02521 819 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02521 819 ProSiteProfiles Bulb-type lectin domain profile. 21 149 IPR001480 -
Rops6g02521 819 Gene3D - 148 271 IPR036426 -
Rops6g02521 819 Gene3D - 25 147 IPR036426 -
Rops6g02521 819 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Rops6g02521 819 Pfam D-mannose binding lectin 86 165 IPR001480 -
Rops6g02521 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 150 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02521 Rops-Chr6 45673609 45676261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02521 472 780 Receptor kinase-like Gene Family AT5G20050 43.653 7.86e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops6g02521 Pkinase 1.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02521 - - gmx:100810753 1308.12