Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02510 ATGCCAACATCAACGGCAACAGAAGCGTTTGGTGGTGTAGAAACTCCAAATGGAGACTCATCCAACACTCATGCCTCTCCCAAACACAGCCCTCAAGAATCGCGTGACCTCTTTCCTTTATTTTCTTCTTCTCACCCCATCACTCTTAAGTTCATGGACGTGGGATACCGATTGAAGATAGAGAACAAACAAAGAAGGGGAGGATGCATCAAGAGATTATTTACGACGCACGAATCATCACCGTCGGATCAAATATCAACGGTGGGAGCTTCGCAAGAGCGTATCATTTTAAACGGCGTAACGGGGATGGCGTACCCAGGGGAGATCCTAGCCATCCTGGGCCCATCAGGGAGCGGGAAATCAACGCTCCTAAACGCGCTCGCAGGTAGGCTCCATGGAAACGGCCTCACCGGAACAATCCTCGCCAACACGGCGAAACTCAACAAAACGATTCTCCGGCGAACCGGTTTCGTCACACAAGACGACATCCTCTACCCTCACCTCACGGTGCGGGAAACCTTGGTTTTCTGCTCCATGCTTCGCCTCCCGAGGAAGCTGCCGCGTGAGGCTAAGGTTGCTGCGGCCGAGTCGGCGATCGCGGAGCTTGGACTGAGAAAGTGCGAGGACACTATAATCGGAAACAGCTTCATCCGCGGAGTTTCCGGTGGGGAGAGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGGCCCGTCGCTGTTGATCCTCGACGAACCTACCTCCGGCTTGGACTCCACGGCGGCGCACCGCCTTCTAGTGACTCTTGGATCGCTGGCGAAGAAAGGGAAAACGGTTATAACGTCGGTGCACCAACCTTCAAGCCGAGTGTACCAGATGTTCGACAAAGCACTTGTTCTATCGGAAGGACACTGTTTGTACTTCGGCAAAGGAAACGACGCCATGCGCTATTTTGAGTCTGTTGGGTTCGCGCCGTCTTTTCCGGTAAATCCGGCCGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTCGATGGTCTAAGTGAAAGAGATAGGCCAAACATAAAGCAACATCTAATTCATTCATACAACACAGTACTGGGTCCCAAGGTCAAAGTTGCCTGCATGGATGTTGCCAGTGTTCCTACAAAAAACACTCACCCTTTGAGAAGCAGCTCTTCCAAAGAACGTAGATATAGTGACAGAGTTAGCTTCTTTGATTGGTTTTACCAATTCAGGATTCTGCTCCAGAGAAGCCTCAAAGAAAGAAAGTATGAATCCTTCAACACTCTGAGAGTCTTTCAAGTCATTGCTGCTGCACTATTAGCTGGTTTAATGTGGTGGCACTCAGACTATAGGAATATTCAAGATAGGCTTGGCCTGCTCTTCTTCATTTCCATCTTTTGGGGAGTCTTCCCGTCTTTCAACTCAGTTTTTGCTTTCCCACAAGAACGTGCTATCTTCATGAAAGAGAGGGCCTCTGGTATGTACACATTGTCGTCCTATTTTATGGCTCGCATAGTTGGAGACCTACCCATGGAGCTTATTCTTCCCACAGTTTTCCTCATTATCACATATTGGATGGGTGGATTAAAGCCTGATTTCTGGGCTTTTCTCTTGACTTGGTTGGTTGTTCTTGGATACGTGCTAGTATCACAGGGTCTTGGCCTTGCTTTAGGTGCAGCAATAATGGATGCAAAACAGGCTTCCACAGTTGCAGCAGTGACAATGCTAGCATTTGTCTTAACAGGTGGATACTATGTCCATAAGGTACCATCATGTATGGCTTGGATCAAATATATATCCACAACCTTTTACTCTTATAGGCTGCTGACTAGAATCCAGTATGGGGATGGCAAGAAAATATTATATCTATTGGGTTGCTACCATGGTGGTAGTGATAGTGCTAGCTGCAAGTTTGTTGAAGAAGATGTGGTGGGGCAAATTGGCACTGTGGGAAGCATTGGAGTATTGTTTTTCATGTTTGTGTTTTACAGATTATTGGCCTACCTTGCCTTGAGGCGCATCAAGAGTTGA 2019 0.4819 MPTSTATEAFGGVETPNGDSSNTHASPKHSPQESRDLFPLFSSSHPITLKFMDVGYRLKIENKQRRGGCIKRLFTTHESSPSDQISTVGASQERIILNGVTGMAYPGEILAILGPSGSGKSTLLNALAGRLHGNGLTGTILANTAKLNKTILRRTGFVTQDDILYPHLTVRETLVFCSMLRLPRKLPREAKVAAAESAIAELGLRKCEDTIIGNSFIRGVSGGERKRVSIAHEMLVGPSLLILDEPTSGLDSTAAHRLLVTLGSLAKKGKTVITSVHQPSSRVYQMFDKALVLSEGHCLYFGKGNDAMRYFESVGFAPSFPVNPADFLLDLANGVCHVDGLSERDRPNIKQHLIHSYNTVLGPKVKVACMDVASVPTKNTHPLRSSSSKERRYSDRVSFFDWFYQFRILLQRSLKERKYESFNTLRVFQVIAAALLAGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTVFLIITYWMGGLKPDFWAFLLTWLVVLGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCMAWIKYISTTFYSYRLLTRIQYGDGKKILYLLGCYHGGSDSASCKFVEEDVVGQIGTVGSIGVLFFMFVFYRLLAYLALRRIKS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02510 672 SMART AAA_5 106 297 IPR003593 GO:0016887
Rops6g02510 672 Pfam ABC-2 type transporter 277 355 IPR043926 GO:0140359
Rops6g02510 672 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 80 320 IPR003439 GO:0005524
Rops6g02510 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 313 IPR027417 -
Rops6g02510 672 Gene3D - 86 314 IPR027417 -
Rops6g02510 672 FunFam ABC transporter G family member 22 84 314 - -
Rops6g02510 672 Pfam ABC transporter 97 248 IPR003439 GO:0005524
Rops6g02510 672 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 664 - -
Rops6g02510 672 Pfam ABC-2 type transporter 404 609 IPR013525 GO:0016020|GO:0140359
Rops6g02510 672 MobiDBLite consensus disorder prediction 1 39 - -
Rops6g02510 672 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02510 Rops-Chr6 45524266 45531559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02510 96 308 Calmodulin-binding Proteins AT2G36910 29.018 2.13e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02510 K05681 - gmx:100812367 1138.64