Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02492 ATGGACATGGGCAGGTATGAGTACAACACCTCTTTCCTATTCCTACGTACTTTACTCTTCTTTGGGTTCTGTCCTATGGTTTTGTCTTTGCTGTCTCAAAACCAAACAAACACTATGATCACTCTCTCTCATCTTCTTAATGTCCCTATTTGGAATAGCATCAAAGAACCCAATCCATGTGCATGGAAGGGGGTCAGTTGCGACCTTAGCAACTCTTCTGTGATCAAGATTATCCTATCTGGGTCTTCTCTCTCTTCTTCAGAATTTCTGCCCGTTCTTTGCAAAATTGAAACTTTGCAGCACCTTGATATCTCCGATAACCATATAAGCTCTATCCCAGATGAGTTCATAGCTGAATGTGGGAAGATTGAGGGTATAAAGCTGCTGAATTTCAGTGGAAACGTGTTAAATGGTGCTTTGCCTACTTTTCATGGTTTTGATGGATTGGAATCCTTGGATTTGTCTTTCAATGGCTTGAGAGGGAGTATTGATTTACAGCTAGATGGATTGGCTAGCCTCAAGATTTTGAATCTTAGTAATAATCACTTCACTGGGAATCTTCCTACCAAGCTGGGAGGGTCTATGGTTCTGGAGCAGCTTCTGCTTTCAAGGAATCATTTTCAAGAAAAAATCCCAGATCAAATTTTGAGCTATAAAAATTTGACTGTGATTGATCTTAAGGAAAATGAGCTTTCAGGGTCTATTCCTAGCAATATTGGAAATCTATCCAAATTGGAAATTTTGAGTCTTTCCTCTAATAAACTTGATGGGAAAATCCCACTAACACTCTTGAACATCACAACCCTTACAAGATTTGCTGCAAATCAAAACCATTTCACTGGTGCTATTCCTCTTGGAATTACAAAATTTCTCAGGTATTTGGATCTTAGTTATAATGAATTATCTGAGTCCATTCCAGAAGACCTTTTATCTCCATCACAGCTGCTGGCTGTGGATTTGTCCTATAACAAGTTACATGGGTTTTTACCAGCAAATATTTCTCCTAGCTTAGTCAGGTTGAGACTAGGGGGAAATTTCCTGAGTGGGGAGGTTCCTTCAGGTACTTGTGAAAACGTTCAAAATTTGACATACATGGAGCTGGAAAACAATAACTTGACAGGTTTGATACCTGCCGGGTTGGGTACTTGTCAAAAATTGGCCTTGTTGAATTTGGCTGAGAACCAATTGGATGGGGCATTGCCTTCAGAACTTGGCAAACTTAGCAATCTTCAAGTCTTGAAGCTTCAAATGAACAACCTTAATGGTACCATCCCAAGTCAAATTGCCCAACTACACAAGTTGTCTACCTTGAATTTGAGCTGGAATTCTCTGGATGGACCAATTCCATCTGACATGTCAAGCTTGACAAGCCTTATATTCATGCACTTGCAAGGAAACAAGCTTAACGGTTCTATACCCTCATCCATTAGCAACTTGAGATCTCTTATAGAAGTCCAACTTGGGGGAAACAAGCTAAGTGGTAACATTCCAAATATGCCATTGAGTCTACAGATTGCCTTGAACCTCAGTAGTAACCTCTTTAGTGGAACTATTCCTAGCAGTTTTGGTGATTTGATTAATCTAGAAGTTTTGGATCTCTCAAATAACAACTTTTCTGGTGAAATTCCTGCATCTCTGACAAAAATGGAAGCATTGACACAGTTGCAACTTGCAAACAATCATCTGTCTGGTATCATTCCAAAATTTGGTTCTTATGTTAAAATTGATTCAAGAGGAAATGATGTCATAAACAATAGTGATGTCACACCCAACAGTTCTCCGAGAGGAGCAAAGAATGGGAAATCCGTTGCTGTGGCTATTCTTGTTGCAATTGCTGCTGCTATTTTTCTGGTTGGTCTGGTCTCCCTGTTGGTTGTATCAATATCACGACACTATTGCAAGGTTAACGATGAACACTTACAGTCAGGCGAAGATGAAAATCTTCACCTTCCTCAGGTTATCCGAAGTAATTTGTTAACTCCAAATGGGATCCATAGATTAAACATTGACTTCTCCAAGGCCATGGAAGCTGTTGCTGAGACATCAAACATTACTCTGAAAACTAGGTTTTCAACTTATTATAAGGCCATTATGCCATCTGGATCAATCTATTCTGTCAAGAAGCTTAACTGGAGTGACAAGGTATTCCCAATGAGTAGTCTTGATAAATTTGGGAGAGAGTTAGATATCTTGGCAAAGTTGAACAATTCAAATGTCATGGTTCCTCTAGCCTATATTCTGTCCACTGACAGCGCTTATATATTATATGAGTTTGTCTCAAACGGCTCCCTTTTTTATGTGCTTCATGGAAGCATGGGAAACTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGTGGCTCAGGGTCTCTCTTTTCTGCATGGATTTTCCTCAAGTCCAATACTTCTCCTGGACTTATCAAGTAAAAGTATTATGCTGAAATCCCTCAGGGAGCCTCTAGTTGCGGATATTGAACACTCTAAGGTGATTGATCCCTCCAAGAGTACGGGGAGTTTTTCTGCGGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCATACACAATGAGAGTAACAATGGCAGGGAATGTCTACAGCTTCGGGGTCATTCTACTTGAATTGCTGACAGGCAAACCTGCAGTGACGGAGGGAACTGAATTGGTCAAGTGGGTTTTGCGTAATTCAAGAAATCAAGATTACATTCTTGATTTTAATGTTAGTAGAACATCGCAGGCTGTCAGAAGCCAAATGCTTGCAGTTCTGCAGACTGCTCTTGTTTGTGTAAGCACATCCCCTGAAGCAAGACCAAAGATGAAGACTGTGCTACGGATGTTGCTAAATGCTAGATAA 2859 0.4022 MDMGRYEYNTSFLFLRTLLFFGFCPMVLSLLSQNQTNTMITLSHLLNVPIWNSIKEPNPCAWKGVSCDLSNSSVIKIILSGSSLSSSEFLPVLCKIETLQHLDISDNHISSIPDEFIAECGKIEGIKLLNFSGNVLNGALPTFHGFDGLESLDLSFNGLRGSIDLQLDGLASLKILNLSNNHFTGNLPTKLGGSMVLEQLLLSRNHFQEKIPDQILSYKNLTVIDLKENELSGSIPSNIGNLSKLEILSLSSNKLDGKIPLTLLNITTLTRFAANQNHFTGAIPLGITKFLRYLDLSYNELSESIPEDLLSPSQLLAVDLSYNKLHGFLPANISPSLVRLRLGGNFLSGEVPSGTCENVQNLTYMELENNNLTGLIPAGLGTCQKLALLNLAENQLDGALPSELGKLSNLQVLKLQMNNLNGTIPSQIAQLHKLSTLNLSWNSLDGPIPSDMSSLTSLIFMHLQGNKLNGSIPSSISNLRSLIEVQLGGNKLSGNIPNMPLSLQIALNLSSNLFSGTIPSSFGDLINLEVLDLSNNNFSGEIPASLTKMEALTQLQLANNHLSGIIPKFGSYVKIDSRGNDVINNSDVTPNSSPRGAKNGKSVAVAILVAIAAAIFLVGLVSLLVVSISRHYCKVNDEHLQSGEDENLHLPQVIRSNLLTPNGIHRLNIDFSKAMEAVAETSNITLKTRFSTYYKAIMPSGSIYSVKKLNWSDKVFPMSSLDKFGRELDILAKLNNSNVMVPLAYILSTDSAYILYEFVSNGSLFYVLHGSMGNSLDWASRYSIAVGVAQGLSFLHGFSSSPILLLDLSSKSIMLKSLREPLVADIEHSKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVLRNSRNQDYILDFNVSRTSQAVRSQMLAVLQTALVCVSTSPEARPKMKTVLRMLLNAR* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02492 952 Gene3D Phosphorylase Kinase; domain 1 663 758 - -
Rops6g02492 952 Pfam Protein kinase domain 690 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02492 952 SUPERFAMILY L domain-like 299 572 - -
Rops6g02492 952 Gene3D Ribonuclease Inhibitor 31 195 IPR032675 -
Rops6g02492 952 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Rops6g02492 952 Gene3D Transferase(Phosphotransferase) domain 1 759 952 - -
Rops6g02492 952 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 647 758 - -
Rops6g02492 952 ProSiteProfiles Protein kinase domain profile. 679 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02492 952 Gene3D Ribonuclease Inhibitor 196 289 IPR032675 -
Rops6g02492 952 SUPERFAMILY Protein kinase-like (PK-like) 690 948 IPR011009 -
Rops6g02492 952 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 331 595 - -
Rops6g02492 952 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 190 283 - -
Rops6g02492 952 Pfam Leucine rich repeat 98 159 IPR001611 GO:0005515
Rops6g02492 952 Pfam Leucine rich repeat 335 396 IPR001611 GO:0005515
Rops6g02492 952 Pfam Leucine rich repeat 507 562 IPR001611 GO:0005515
Rops6g02492 952 Gene3D Ribonuclease Inhibitor 290 594 IPR032675 -
Rops6g02492 952 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 219 948 - -
Rops6g02492 952 FunFam leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 759 952 - -
Rops6g02492 952 SUPERFAMILY L domain-like 45 330 - -
Rops6g02492 952 SMART LRR_typ_2 455 479 IPR003591 -
Rops6g02492 952 SMART LRR_typ_2 242 266 IPR003591 -
Rops6g02492 952 SMART LRR_typ_2 96 119 IPR003591 -
Rops6g02492 952 SMART LRR_typ_2 359 383 IPR003591 -
Rops6g02492 952 SMART LRR_typ_2 549 571 IPR003591 -
Rops6g02492 952 SMART LRR_typ_2 407 431 IPR003591 -
Rops6g02492 952 SMART LRR_typ_2 525 548 IPR003591 -
Rops6g02492 952 SMART LRR_typ_2 288 312 IPR003591 -
Rops6g02492 952 SMART LRR_typ_2 170 194 IPR003591 -
Rops6g02492 952 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 33 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02492 Rops-Chr6 45284725 45288336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02492 149 952 Receptor kinase-like Gene Family AT2G41820 38.535 1.77e-150 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops6g02492 Pkinase 4.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02492 - - gmx:100796647 1221.84