Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02475 ATGAGCTTCTCATCTAGGCCATCCTCTTGCTCCAGCAGGATGCCACAGATTGCTGAAAATAAATATAATGACCTGCAAGAAAATTGTGTTGAAAGTAGAAACATTGGAAATGATAATGGCAGCCATAAATGTTACATGCCTACCAGCACCAGTGACTTCTGGGATGGTTCTGTATTCAATGGCCACAAAACAACTAGTAACAATGGTGAGATCATGTTTTCCACCACAAATGCTTTGGAAACTCAGGATGCAGACTTCAGATATGAAAGACTTGGTTTGAGCCACCATTTGAGTCTGCCTAGCTCTTCTACTAAGATAGCTACCATGGAGAAGTTTTATCAAATTCAAGGATCTGTTCCATGTAAAATTCGTGCCAAAAGAGGCTTTGCCACTCACCCAAGAAGCATTGCAGAGAGGAAAAAGGCTTGTCCTAATGTGGCTGGACCTCCTCCTGTTGCTGATGGAATTGCAGCGGCTAAAAGAGGCCCCCCAAAACCTGGTCAAAAGAAAGTCACCACAAAACCAAAGCCTGAGGAACTCATTGAAATAAGTCCAGACAAAGAAGAGCTAGAAGCAAGGCAGCATGCGGAGGAACAGGTTGTTGACATTGATGCTGGAGATGCTGGCAATGAACTTGCTGCTGTAGAATATATTGAAGATATTTACAAGCTCTATAAGCTGGTTGAGGGATTGTGCTAA 699 0.4292 MSFSSRPSSCSSRMPQIAENKYNDLQENCVESRNIGNDNGSHKCYMPTSTSDFWDGSVFNGHKTTSNNGEIMFSTTNALETQDADFRYERLGLSHHLSLPSSSTKIATMEKFYQIQGSVPCKIRAKRGFATHPRSIAERKKACPNVAGPPPVADGIAAAKRGPPKPGQKKVTTKPKPEELIEISPDKEELEARQHAEEQVVDIDAGDAGNELAAVEYIEDIYKLYKLVEGLC* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02475 232 MobiDBLite consensus disorder prediction 159 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02475 Rops-Chr6 45090339 45095230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02475 93 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 67.308 4.41e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02475 - - cam:101493473 203.371