Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02471 ATGGCCCCACTTATCCTGACACCACAACCTTGCTGTAATAGTTTCATTGTTGAACTTTTCTCCTTCCCTCCTTTGTCCTTTCCTTCTCTTCACAGGGCATGCACCTTCTACATTTGCACAGAGATCTGTGATTCTCATGCAAAGATAAAGGAACTGCAGATGGGGAGGAAAGGGAGTTGGTTTTCTACGGTGAAGAAAGTTTTCATTTCTGATTCCAAAAAAGATCAGAAACATCATAATAAGTCGAAGCTAGCGTGTTTTGGGCATCATCATCACAATGAGGATCCTGAAGGAGCACCAATTTATGTTGTTCCCTCTCTTCCACCTAGAAAAGAGGTTAAACCACAAACTGAGGCAGAGAATGAACAGAACAAGCAAACTTTTTCGTTGGTTTTAGCCACTGCTGTTGCAGCCGGGGCTGCAGTTGCTGTTGCTGCTGCAGAGGCTGCTCGTCTCAAAAATGTGTCTCGTTTCCCTGGAAAAACCAATGAAGAAATAGCAGCCATCAAGATTCAGACGGCATTCCGTGGATATCTGGCAAGAAGAACATTGCGTGGATTGAGAGGTTTGGCAAGGTTGAAAACATTGGTACAAGGGCAATCTGTTCAACGGCAAGCAGCTACCACCTTACAATGCATGCAAACTCTTTCAAGACTGCAGTCTCAGGTTCGCGCACGGAAGATCAGAATGTCTGAGGACAACCAGTCCCTTCATCGGCAACAGCAGCAAAAACGTGAGAAGTTGCCTGCTCAGCCAATTGGAGAAAAATGGGATGATAGCTCGAAATCAAAGGAGCAAGTTAAAGCAAAATTGTTGAACAGGCAAGTAGCCGCTATGAGAAGAGAGAAGGCTTTGGCCTATGCAGTAACACATCAGCAAACGTGGAGGAACTCTCCAAAATCTGCAAATGCCACCTTTATGGATCCAAACACTCCCCATTGGGGCTGGAATTGGCTTGAGAGATGGATGGCTGCAAGGCCATGGGAGGGTCAAAACACTATCTATCACAATGAAGAACATGCATCTGCAAAGAGTGCTGCAAGCCATACCATGTCAGTTGGTGAAGTAACCAAACTATATTCTCTCCGTGATCAGAATCATGATGGTAAGAATTCACCAACTAGCCAAAAAGCAAGCCGTCCTCGTAGTCACAACAATTCCCCTTCAACTCAACCTTCAAGGGCCTCACCTTTGACATCTGCAAATGGAAAGACAAAGGCAGCAAGTCCAAAGGTTAGTTCATGGGGTGGTGATGGTGACTCAAGAAGCACATTTATCGAAAACTCAGAAAGCAATCGCAGGCATAGCTTTGCAGTATCTCCAAGAGATAATGAGAGCCTTACAAGCTCACCGAGTCACACAGCATCATCCACAAAGGTTGCAAAGTCGAGGCCTAAAGTGCAAAGTCCATCTGTTGTAAATAAGAATGGAACAGCTGTTTATGCAAAGAAGAGGCTTTCTTTCCCAGCTTCTTCATCCGGTTCAAGAAGGCATTCTGTTCCAACTAAGTTGGGAATGGTTTCCAATAAGAATGTTGCTACCATCCCTGAAGAGAGAGAGAAAGTGAAAGTGAAAAATGGAGGGAGCAGGTAG 1593 0.4488 MAPLILTPQPCCNSFIVELFSFPPLSFPSLHRACTFYICTEICDSHAKIKELQMGRKGSWFSTVKKVFISDSKKDQKHHNKSKLACFGHHHHNEDPEGAPIYVVPSLPPRKEVKPQTEAENEQNKQTFSLVLATAVAAGAAVAVAAAEAARLKNVSRFPGKTNEEIAAIKIQTAFRGYLARRTLRGLRGLARLKTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKIRMSEDNQSLHRQQQQKREKLPAQPIGEKWDDSSKSKEQVKAKLLNRQVAAMRREKALAYAVTHQQTWRNSPKSANATFMDPNTPHWGWNWLERWMAARPWEGQNTIYHNEEHASAKSAASHTMSVGEVTKLYSLRDQNHDGKNSPTSQKASRPRSHNNSPSTQPSRASPLTSANGKTKAASPKVSSWGGDGDSRSTFIENSESNRRHSFAVSPRDNESLTSSPSHTASSTKVAKSRPKVQSPSVVNKNGTAVYAKKRLSFPASSSGSRRHSVPTKLGMVSNKNVATIPEEREKVKVKNGGSR* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02471 530 Coils Coil 262 282 - -
Rops6g02471 530 PANTHER IQ-DOMAIN 5-RELATED 54 502 - -
Rops6g02471 530 MobiDBLite consensus disorder prediction 488 508 - -
Rops6g02471 530 MobiDBLite consensus disorder prediction 366 409 - -
Rops6g02471 530 MobiDBLite consensus disorder prediction 363 473 - -
Rops6g02471 530 SMART iq_5 163 185 IPR000048 GO:0005515
Rops6g02471 530 ProSiteProfiles IQ motif profile. 164 192 IPR000048 GO:0005515
Rops6g02471 530 Gene3D iswi atpase 161 188 - -
Rops6g02471 530 MobiDBLite consensus disorder prediction 229 264 - -
Rops6g02471 530 Pfam IQ calmodulin-binding motif 167 185 IPR000048 GO:0005515
Rops6g02471 530 MobiDBLite consensus disorder prediction 416 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02471 Rops-Chr6 45027688 45031501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02471 54 504 IQD Protein Family AT3G52290 45.957 3.67e-94 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02471 - - gmx:100807725 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02471 6 45027688 45031501 Rops6g02471 6 45027688 45031501 ECH