Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02454 ATGGAACAAGTTCCTCAGAAGAAGTTGGAGCAAACACCAACATGGGCTGTTGCAGTTGTGTGCCTTGTAATGCTTGCTATTTCAATCATCATTGAGCATAGCATTGAAGCTATTGCAAAGTGGTTAGAAAAGAAACACAAAAAGGCTCTTCATGAAGCGCTTGAAAAGGTCAAAGGAGAGCTTATGCTGCTGGGATTCATATCCTTGCTCCTAACGGTGTTTCAAGATCACATTTCTGATATCTGCATACCTAAACAAGTTGCATCCACTTGGCATCCTTGTAATCCCAATCAAAAGAGTAAAGATCCAGAAGGATATTTTGACAAATGTGCAGAAAACGGTAAAGACCAAGTTGCTTTTGTGTCTGAATATGGGATTCACCAGCTCCACATATTCATATTTGTACTTGCTATTTTTCACATCCTACAGTGCATCATAACACTAGCTTTAGGTAGAACTAAGATGGCAATATGGAAGGCGTGGGAGGATGAAACAAAGTCTGTTGAACATCAGTACTACAATGATCCTCAGAGGTTCAGGTTTGCAAGGGATACAACGTTTGTACGAAGGCACTTGAACTCTTGGAGTCGATCACCAATTTTCTTATGGATAGTTAGCTTCTTCAGACAATTCTATGGATCAGTTAATAAAGTTGATTATTTGGCATTACGGCATGGATTTATCATGGCGCATCTGGCACCGGAAAGTGAATCAAAATTTGATTTCCAGAAGTATATCAAGAGATCACTTGAAGAGGATTTTAAAGTTGTGGTGGGAATAAGTCCAATCATATGGTTCTTTGCAGTGCTAATCCTGCTGACAAATACTAATGGGTGGTATTCTTATCTTTGGCTTCCATTTATCCCATTAATTATAACCTTATTGGTGGGTACTAAGCTACAAATGATCATAACAATGATGGCGCTAAGGATTCAAAATAGAGGGGATATTATCAAGGGTGCACCTGTGGTTGAGCTTGGAGATGACTTGTTCTGGTTCAATCGCCCTCGCCTTGTCCTCTCTTTGATTCATCTTGTTCTCTTTCAGAATGCATTTCAACTGGCCTTTTTTGCTTGGAGCACATATGATAACAAGTTCAAAATAAACTCTTGCTTCCACCGAACTACTGCAGATATTGTCATCAGACTCACAATGGGGGTTGTCACACAAGTTCTATGCAGCTATGTGACTTTGCCCCTCTATGCTCTAGTCACACAGATGGGTTCAAGCATGAGACCCACCATTTTCAGTGACAGGGTAGCAGCAGCACTAAAGAACTGGCACCACACTGCAAGAAAGCATGTCAGACACAACAAAGATTCTAATGCTAACACACCATTCTCAAGCAGACCAACAACGCCAACATATGGCATGTCACCAGTTCACCTGCTTTACAAGCACCCTGGTCACAGTGACAGTCCACTAGCTTCTCCAAAAACATCCAATTATGAAAATGAACAATGGGATGTTGAAGGGTCACCTTCCCCTAGCAACCATGCAAGAGGTCATCATGAAGAGAATTCTCAGCAGATGCAAGTTATGGATCCACGTACAACAGAATTGCCTCCTGCTGGATTAAGTCCTATTAGAACACAACATGAAATCAATGTTATTGTATCAGAATTTTCATTTGGGAAGGCACACACTAGTGGAGTCTAG 1659 0.4099 MEQVPQKKLEQTPTWAVAVVCLVMLAISIIIEHSIEAIAKWLEKKHKKALHEALEKVKGELMLLGFISLLLTVFQDHISDICIPKQVASTWHPCNPNQKSKDPEGYFDKCAENGKDQVAFVSEYGIHQLHIFIFVLAIFHILQCIITLALGRTKMAIWKAWEDETKSVEHQYYNDPQRFRFARDTTFVRRHLNSWSRSPIFLWIVSFFRQFYGSVNKVDYLALRHGFIMAHLAPESESKFDFQKYIKRSLEEDFKVVVGISPIIWFFAVLILLTNTNGWYSYLWLPFIPLIITLLVGTKLQMIITMMALRIQNRGDIIKGAPVVELGDDLFWFNRPRLVLSLIHLVLFQNAFQLAFFAWSTYDNKFKINSCFHRTTADIVIRLTMGVVTQVLCSYVTLPLYALVTQMGSSMRPTIFSDRVAAALKNWHHTARKHVRHNKDSNANTPFSSRPTTPTYGMSPVHLLYKHPGHSDSPLASPKTSNYENEQWDVEGSPSPSNHARGHHEENSQQMQVMDPRTTELPPAGLSPIRTQHEINVIVSEFSFGKAHTSGV* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02454 552 PANTHER MLO-LIKE PROTEIN 1 7 510 IPR004326 GO:0006952|GO:0016020
Rops6g02454 552 MobiDBLite consensus disorder prediction 431 529 - -
Rops6g02454 552 MobiDBLite consensus disorder prediction 441 456 - -
Rops6g02454 552 MobiDBLite consensus disorder prediction 474 494 - -
Rops6g02454 552 Pfam Mlo family 7 466 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02454 Rops-Chr6 44868248 44875215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02454 4 546 MLO family AT2G39200 58.953 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02454 K08472 - gmx:100816112 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02454 6 44868248 44875215 Rops6g02454 6 44868248 44875215 ECH
Rops6g02454 6 44868248 44875215 Rops5g02097 5 45507373 45518298 PCT