Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02441 ATGCGGTCAATTCCTCTTGGAACTTCAGTATCCCCAACTCCTATAAACACCTCAAAAATCTCACCTTTTAATATTAATTTTAAGAAACCAAGCACTTTCCCTTCTTGGGTTTCATCCCCTTCTTCTCATGAATTCTCTTTCCTTTCTCTCTCCCAATCAGGAATATGCAGAGCCAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTGAAATTATTGTCAGAGAGGCCAGGTTAGAGGACTGGTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCTTTAGATTTTGTGATGAGGATGGACAGATTGGTGGCTATGTTAGCAGGATTCTCTATACCAAACGGTTGCAAGAGAACCTGTTTGGTTGCTGTTATTGGCAACTCACTTGATGAAACTTTCTTATTTGGAAGTGAGGATTTCAGGATTGGTGGTATTGATGGGAAATTCAGCCTCAACAAGGGATATGTGGCTGGTATATTAACTGTAGATACTGTTGCAGACTTTCTACCTAGAAAGGGGCCACTGCGACAGAGAAGGACTGGAATTGCATATATATCAAATGTGGCAGTAAGGGAAAAATTTAGGCGGAAGGGAATAGCTAAACAACTGGTAGCCAAGGCAGAATCACAGGCCAGAAGTTGGGGCTGTCGTGCCATTGCATTACACAGTGATTTGAAAAATCCTGTGGCCACAAAGTTATACCAAGGCCAAGGTTTCAAAAGTATCAAGGTTCCAGAAGGAGCTAACTGGCCTCAACCAAAGACCTCACCAGATATTAAGTTCAACTTCATGATGAAGCTTCTCAACAAACCAGCTGCTTCTAAATCTCATTAG 855 0.4257 MRSIPLGTSVSPTPINTSKISPFNINFKKPSTFPSWVSSPSSHEFSFLSLSQSGICRASQVVDLFPTVSPEIIVREARLEDWWEVAETHCSSFFPEYSFPLDFVMRMDRLVAMLAGFSIPNGCKRTCLVAVIGNSLDETFLFGSEDFRIGGIDGKFSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKQLVAKAESQARSWGCRAIALHSDLKNPVATKLYQGQGFKSIKVPEGANWPQPKTSPDIKFNFMMKLLNKPAASKSH* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02441 284 CDD NAT_SF 188 229 - -
Rops6g02441 284 Gene3D - 68 250 - -
Rops6g02441 284 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 72 277 IPR000182 GO:0016747
Rops6g02441 284 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 71 253 IPR016181 -
Rops6g02441 284 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 72 273 - -
Rops6g02441 284 Pfam Acetyltransferase (GNAT) family 161 246 IPR000182 GO:0016747
Rops6g02441 284 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02441 Rops-Chr6 44577901 44580546 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops6g02441 Acetyltransf_1 9.7e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02441 - - adu:107467912 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02441 6 44577901 44580546 Rops6g02441 6 44577901 44580546 ECH
Rops5g02252 5 49126260 49130323 Rops6g02441 6 44577901 44580546 PCT