Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02428 ATGTGTAGAGAAACTATCAGACCATTCTTGCCCACACCAGATGAACATAGATTCTTCCAACTTTGTCTGCTTGATCAGCTTCAAGTCATCACCTATTTGCCAGTAATTTTATTTTACCCCAAGAAGGAAGGCCTTCCAGAACCCTCCCATGTCTGTGCCCAATTGAAAAAATCACTGTCTGAGACACTTACCATTTTCTACCCTGTAGCTGGGAGAAGAAAAGACCATACTTTTATCACTTGCAATGATGAAGGTGCTCTTTACTTGGAAGCCAAGGTGAACCTTAAAATGGTTGAGTTCCTCACACCACCAAAGTTAGAATTTCTAAATAAATTGCTTCCATGTGAGCCTAATAAGATGCATTCAAATAGAGAAGAGTTACCCCAAGTACTTGTACAAGTGAACATATTCAAGTGTGGTGGAATAGCTATAGGCATGTGCAATCTCCACACTCTCCTTGATGGTTGTTCTGGCAGCCTCTTACAAACTACTTGGGCTGCCATTTGCCGTGGTTCAATAGGGGAAGTTCAAAGCCCTGATTTCTCTTCTGCTTCTTCTTTCTTTCCACCACTTAATCATTTGAGTTTACATGATCATGTTGCAAAGGTTAATGAGGACTCAGACATACAAAAGAAGTGCACCACAAGAAGATTTGTTTTTGATGCAGAATCAATCAACACCCTTAGAGCTGAAGCAAAAGATGATGATGAAGGCTCAAAATCCCCTACACGATATGAAGCACTGGCTACTTTCCTTTGGAAACATATGACACTTGCATGCAAGATGGAATCCGGTGATAGCACAAGACCTGCAGTGGCTATCCATATTGTGGACATGAGGAGGAGGATGGGTGAGCCTTTCTCTAGATACACCATTGGCAACATTCTGTGGCCAGTGATGGTATTTTGTGAAACAATCCATGCAGACACTGATATTAGATATTTGGTTAGCATTGCCAGAGAGAAATTTGGAAAGCTCTCAAGGGATTTGTTTTTGAGAGTGAAAAGTGATCCAAATATCCTTGGGAGCAATCAGTGTGTGGATCTGCCTCAAGGTATAGAAACAAGAAGTCCAATTCCAATTGTGTTGACAAGTTGGTGTGGTTTAAATTTCAGTGAGCTTGATTTTGGTTGGGGGAAGCCTTTTTGGGTTGGTGTTAGAGGAGGTGATCAGGAAACTCTCCCCAATGTAGCTGTTATCATGGAAACAGATGCAGGCATGGAAGCATGGCTGACAATGGAAATGCAACACATAGCCATCTTGGAAGAAGATATGGAGTTTCTCAGATTAGCTTTGCCTAATCCTAGTGTTTCAAACATTTAA 1323 0.4135 MCRETIRPFLPTPDEHRFFQLCLLDQLQVITYLPVILFYPKKEGLPEPSHVCAQLKKSLSETLTIFYPVAGRRKDHTFITCNDEGALYLEAKVNLKMVEFLTPPKLEFLNKLLPCEPNKMHSNREELPQVLVQVNIFKCGGIAIGMCNLHTLLDGCSGSLLQTTWAAICRGSIGEVQSPDFSSASSFFPPLNHLSLHDHVAKVNEDSDIQKKCTTRRFVFDAESINTLRAEAKDDDEGSKSPTRYEALATFLWKHMTLACKMESGDSTRPAVAIHIVDMRRRMGEPFSRYTIGNILWPVMVFCETIHADTDIRYLVSIAREKFGKLSRDLFLRVKSDPNILGSNQCVDLPQGIETRSPIPIVLTSWCGLNFSELDFGWGKPFWVGVRGGDQETLPNVAVIMETDAGMEAWLTMEMQHIAILEEDMEFLRLALPNPSVSNI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02428 440 Gene3D - 1 200 IPR023213 -
Rops6g02428 440 Pfam Transferase family 3 427 - -
Rops6g02428 440 PANTHER F21J9.9 2 429 - -
Rops6g02428 440 Gene3D - 210 430 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02428 Rops-Chr6 44351724 44353046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02428 55 423 Monolignol Biosynthesis Gene Families AT5G48930 23.896 3.60e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02428 - K13065 gmx:102668997 755.747