Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02426 ATGAAGATGAAGATGAAGGTCAAGCTTGTGATCAAAAGCTGCATGAGGGAACTTTGTAAATTCAGAAGGGTCAGAGCTAATTTTCTCAAAAGTGCAATTCAGGAACATATTCCCATATGGGTTGCATCCTATTCCTCACAAGAGAAGTCACATTCATACGTACCCAAAGATGTACCAAAAGGGCACCTAGTTGTGTATGTTGGTGAGGATTGCAAGAGATTTGTCATCAAGGTGGGTATACTCAATCATCCACTCTTCAAGGCCTTGCTGGATCATGCAGAGGATGTGTTTGGGTTCACCAGTGGTTCTAAACTCCGCATTCCTTGCAATGAGAACATTTTCCTCAGCATTCTTCATAATGCTGGTGATCTTGTCCAGGATCAGAGGCTCTTCTTAAACTGTTTCTAG 408 0.4216 MKMKMKVKLVIKSCMRELCKFRRVRANFLKSAIQEHIPIWVASYSSQEKSHSYVPKDVPKGHLVVYVGEDCKRFVIKVGILNHPLFKALLDHAEDVFGFTSGSKLRIPCNENIFLSILHNAGDLVQDQRLFLNCF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02426 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 45 116 IPR003676 GO:0009733
Rops6g02426 135 Pfam Auxin responsive protein 46 118 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02426 Rops-Chr6 44313554 44313961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02426 57 118 Calmodulin-binding Proteins AT4G34750 46.774 1.96e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02426 K14488 - adu:107467907 140.198