Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02422 ATGTGCAGGACCAAAAAGAGCACCAGCGTGATAGAACCCAGGAACAAGAACATGCGATCACGACCAACCTTAACATCTTCGTCCTCGAATTTCCCATCCTCAGCCTCAGGCAGCGATGTCCCCATAACAGAATCAAGAAGCTATGTATACGGCGATAAAGAATACTCCAATTCGTCTTCCATCTCAAGCCACGCCTCTCTTTCTAGCCTCAGAAATACTCTCCCCGAAAACCCTCACATTTACCACTTCTCCGAGATCTCCACTGCCACCGGAAACTTCTCCGGCCCCCGCCTCTCCTCCTCCTCCTCCTCATGGCGCTGTTCCATTCGCGACCGTGACGTCGTCGTTTTCCAGCGCAAGTTCCGTCGCCACTTCGACCTCCCTGAGCTTCGTCACCGCCTCGCCCTCATCTGCCGGACCCACCACAGCAGCCTCGTGAAACTCCTCGGAGCTTCCGTCTCCGGTCACTACATTTACCTCGTTTATGAGTTCGTCCCCGGCGCTAGCCTTGCCGATTGCCTTCGCAATCGCCGGAACCCTAGCTTCACCGATCTCTCCACGTGGACCTCGCGGATGCAGATCGCTTCTGATCTCGCTCACGGTCTTGATTACGTCCACAATTTCTCCGGTACCGGTACCGGTCTCGTTCACAATCATATCAAGAGTTCAAGCATCATCGTGGCTGAGGAGAATTTCAGCGCTAAGATTTGCCATTTCGGCACGTCGGAGCTCTGCGGCGAGGAGGTGGATGCGTCCGGATCGGATTCCGGCCGGAGATTGAGGAGCTCCGGTAGCCGGACGGTGAGGTTCGAGGGGACAAGGGGGTACATGGCGCCGGAATTTCAGGTCACTGGCGTGGCGACGCAGAAGACCGATGTGTACGCGTTCGGTGTGGTGGTTCTGGAGTTGTTGAGCGGGGAAGAAGCGGTGAGCTTCGAATTCGGCGCTGACGGTAGTTACAGGAGGGAAAGCGTGGTGGATACGGCGAGGATTGCGGTGGAGGATCACGGCGGGGTGAGGAAGTGGGTGGATAAGAGGTTGAAGGATTCGTTTCCGGTGGAGGTGGCTTGGAAAATGTTTCGGGTCGGGTTGGAATGCGTAATGGATGATCCGAATGGAAGGCCGGATATGGGTCGGGTCTCAAATGAGGTGTCCAAGCTGTATTTGGAGTCCAAAAAGTGGGCTGACAAAATGGGAACTAATATTGACTTGTCCGTCTCCTTGGCCCCACGATGA 1236 0.5542 MCRTKKSTSVIEPRNKNMRSRPTLTSSSSNFPSSASGSDVPITESRSYVYGDKEYSNSSSISSHASLSSLRNTLPENPHIYHFSEISTATGNFSGPRLSSSSSSWRCSIRDRDVVVFQRKFRRHFDLPELRHRLALICRTHHSSLVKLLGASVSGHYIYLVYEFVPGASLADCLRNRRNPSFTDLSTWTSRMQIASDLAHGLDYVHNFSGTGTGLVHNHIKSSSIIVAEENFSAKICHFGTSELCGEEVDASGSDSGRRLRSSGSRTVRFEGTRGYMAPEFQVTGVATQKTDVYAFGVVVLELLSGEEAVSFEFGADGSYRRESVVDTARIAVEDHGGVRKWVDKRLKDSFPVEVAWKMFRVGLECVMDDPNGRPDMGRVSNEVSKLYLESKKWADKMGTNIDLSVSLAPR* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02422 411 MobiDBLite consensus disorder prediction 1 42 - -
Rops6g02422 411 ProSiteProfiles Protein kinase domain profile. 82 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02422 411 Pfam Protein kinase domain 134 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02422 411 Gene3D Transferase(Phosphotransferase) domain 1 166 406 - -
Rops6g02422 411 MobiDBLite consensus disorder prediction 11 42 - -
Rops6g02422 411 SUPERFAMILY Protein kinase-like (PK-like) 119 385 IPR011009 -
Rops6g02422 411 PANTHER OS09G0572100 PROTEIN 1 411 - -
Rops6g02422 411 Gene3D Phosphorylase Kinase; domain 1 53 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02422 Rops-Chr6 44278619 44280202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02422 76 401 Receptor kinase-like Gene Family AT1G51940 32.448 3.25e-43 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops6g02422 Pkinase 1.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02422 - - mtr:11414164 581.252