Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02416 ATGATGAATAACTCAGTTTCAGAAAACAGTTTTATTATTGAGAGTGATGAAGAGGATGAGGAGAAGGATTTGAACAAAGGTGAAGGTGATGGTAACGATTCTGATTCTTCCAATTACTCAACAAATGAAAACCCCCCACAGAGAAAACCAAGTTCTTACAACATCTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTATATAGTAGTGTACCATCACCAAATATTGGATTTTTGGGCACTCCCACATTATCAAGATTAAGCAGTTCCTTCCTTTCTTCATCTCTAACAAGGAGGCACACTCCTGAAACACTTCCTTCAGAATCAAAACCTCTGATACAACCAACAGAAGATGAGCCACAGAGACGTAGCTCTCATTACTTGCTTCCACCTTCTAGGTTGTCTTCTTTGATTAAGAAGGATTCCAAGGTTTCTCATGAAATTCCTACTCGTCATTGCTCTTTTGGACAGGCTGTGCTTAATGGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGAGGATGGGTGGGGCTTTCTGTCTTGTTCATTTTTGGAATTATTTCCTTTTATACTGGGTTGCTCTTGCGTGCCTGCTTGGACAGTGAACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCTGCTTTTGGTACTATTGGACGTATTGCCATTTCAATAGTATTGTACGTGGAATTATATGGTTGTTGCATTGAATATATAATTTTAGAGGGTGACAACTTGTCTTCCTTATTTCCAAATGCAAACTTAAATTTGGGTGGAATTGAATTGAGTTCACAAACTCTATTTGCTGTGGTTGCCACCTTGGCTGTTCTTCCTACCGTTTGGCTCCGTGACCTAAGCATTCTCAGTTACATCTCAGCTGGTGGAGTTGTTGCATCAATTTTAGTGATTATCTGCTTGTTCTGGGTTGGCGTTGAGGAAGTTGGCTTTCAAAGCAAAGGAACAACATTCAATCTAGCAACTTTTCCTGTTACTTTGGGTCTTTATGGTTACTGCTACTCTGGACATGCTGTATTCCCAAACATTTATACATCCATGGCAAAGCCAAACCAATTCCCTGCAGTGCTCTTAGCAAGTTTTGGAATTTGTACCTTACTATATGCTGGAGGTGCTGTAATGGGATACAAAATGTTTGGAGAAGCTATACTCTCTCAGTTCACTCTTAACCTGCCCCAAGAGTTGGTGGCAACCAAGATTGCTGTCTGGACTACGGTGGTGAATCCATTTACCAAGTATGCGTTGACTATATCTCCAGTGGCAATGAGTCTGGAGGAGTTGATACCATCAGACCAAGCCAAATCTTACCTATATGCCATCTTCATCAGAACAGGGCTGGTAGTTTCTACCTTGGTTATTGGTTTGTCAGTTCCCTTTTTTGGTCTGGTGATGTCATTGATTGGAGCATTACTTACAATGCTTGTTACTTTGATACTACCCTGTGTTTGTTACCTAAGAATCTTGCGGGGCAAAGTCACACGATTACAGACAGCACTTTGCATTACAATTATTACAGTAGGTGTTGTATGTTGTACCATCGGAACATACTCAGCCCTCGCCGAGATTGTTAAGAGTTTGAGTGGATGA 1629 0.4131 MMNNSVSENSFIIESDEEDEEKDLNKGEGDGNDSDSSNYSTNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPTLSRLSSSFLSSSLTRRHTPETLPSESKPLIQPTEDEPQRRSSHYLLPPSRLSSLIKKDSKVSHEIPTRHCSFGQAVLNGINVLCGVGILSTPYAAKEGGWVGLSVLFIFGIISFYTGLLLRACLDSEPGLETYPDIGQAAFGTIGRIAISIVLYVELYGCCIEYIILEGDNLSSLFPNANLNLGGIELSSQTLFAVVATLAVLPTVWLRDLSILSYISAGGVVASILVIICLFWVGVEEVGFQSKGTTFNLATFPVTLGLYGYCYSGHAVFPNIYTSMAKPNQFPAVLLASFGICTLLYAGGAVMGYKMFGEAILSQFTLNLPQELVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSDQAKSYLYAIFIRTGLVVSTLVIGLSVPFFGLVMSLIGALLTMLVTLILPCVCYLRILRGKVTRLQTALCITIITVGVVCCTIGTYSALAEIVKSLSG* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02416 542 MobiDBLite consensus disorder prediction 95 127 - -
Rops6g02416 542 MobiDBLite consensus disorder prediction 95 111 - -
Rops6g02416 542 MobiDBLite consensus disorder prediction 1 55 - -
Rops6g02416 542 MobiDBLite consensus disorder prediction 31 55 - -
Rops6g02416 542 FunFam Amino acid transporter AVT1A 151 539 - -
Rops6g02416 542 Pfam Transmembrane amino acid transporter protein 153 531 IPR013057 -
Rops6g02416 542 PANTHER OS05G0424000 PROTEIN-RELATED 162 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02416 Rops-Chr6 44212048 44219182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02416 2 475 Amino Acid or Auxin Permease AAAP Family AT2G39130 70.041 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02416 K15015 - gmx:100775840 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02416 6 44212048 44219182 Rops6g02416 6 44212048 44219182 ECH