Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02362 ATGGAGTTTATAACTTGTGCATTACTCCTAATGTTATGTGCCACCATTCATGCTCTCATTTCATTCCTTACTAGAACCAGAAAGCCAAACCACAAGCTTCCACCTGGCCCTTCCGGTTTTCCCATCATTGGAAACCTCCTTGAACTTGGGCAAAAGCCACACCGATCTTTGGCCAAACTTGCCAAGATTCATGGCCCTTTGATGAGTCTCAAGCTAGGCCAAATAACCACTGTAGTCATCTCCTCAGCTGAGATGGCCAAAGAAGTGCTCCAAACCCATGACAAATTCTTGTCAAACAGACCCATTCCCCAATCTGTGTCAGTTCTAAACCACGAGCACTATACTCTGGCCTTCATGCCTGTGTCACCTCTTTGGCGAGACTTGAGGAAAATATGCAATAATCAACTATTAGCACTCAAGACTCTTGATGCCAGCCAAGACGTTAGGCGCAAGATAGTGCAACAACTCCTTTTTGATGTGCACAAAAGTAGCCAAATCGGTGAAGCAGTAGATATTGGAAGAGAAGCATTCAAGACCACCATAAATTTGTTATCAAACACCATTTTCTCTATGGATTTGGTTCAGTCCACAGGTACAGCTGGAGAGTTTAAGGATTTGGTGACAAATAGCACAAAACTAGTTGGATCACCAAACATAGCAGAATTTTTTCCATTGCTCAAGATAATTGACCCGCAGGGTGTGAAGAGACAACAAACTAAGAACGTTGCCAAGATGTTGAACATCTTCGACCGCTTAATTAGGCAACGGTTGAAGCTGAGGGAAAGTAAAGGTTCTGACACGCATAATGACATGTTGGATGCGCTGCTCAACATTTCTAAAGAGAACGATATGATGGACAAAACAATGATTGAACATTTGGCACATGATCTTTTTATTGCGGGAACGGATACAACAACTTCAACGCTTGAATGGGCAATGACTGAAGTAGTACTGAACCCAGAAATCATGTCAAAAGCAAAAAAAGAGCTCGAAGAAGTGATAGGCAAAGGTAAAGCTGTTGAAGAATCAGATATTGCTAGACTCCCTTATTTGCGAGCAATCATAAAAGAGACCTTACGCATGCACCCCCCAGTTCCTCTTTTGCTCCCTAGAAAAGCAGAAATAGATGTGGACATATGTGGCCTCACCATCCCTAAGGATGCTCAAGTGCTAGTTAATGTGTGGACAATTGGTAGGGACCCAACCTTATGGGACAATCCAACTTTGTTCTCGCCAGAGAGGTTCCTGGGGTCAGAGATTGATGTCAAAGGTCGAAATTTTGAGCTTGCACCATTTGGTGGTGGGAGGAGAATATGCCCTGGCATGATGTTAGCTATGAGGATGTTGCTCTTGATGTTGGGTTCACTTATCAACTCCTTTGATTGGAGACTTGAAGATGGCATGAAGCCAGAAGATATGGACATGGAAGAAAAATTTGGAATTACTTTACAAAAGGCTCAACCCCTTCGAGTTGTTCCTGTTAACATAAGCAACTATTAA 1500 0.428 MEFITCALLLMLCATIHALISFLTRTRKPNHKLPPGPSGFPIIGNLLELGQKPHRSLAKLAKIHGPLMSLKLGQITTVVISSAEMAKEVLQTHDKFLSNRPIPQSVSVLNHEHYTLAFMPVSPLWRDLRKICNNQLLALKTLDASQDVRRKIVQQLLFDVHKSSQIGEAVDIGREAFKTTINLLSNTIFSMDLVQSTGTAGEFKDLVTNSTKLVGSPNIAEFFPLLKIIDPQGVKRQQTKNVAKMLNIFDRLIRQRLKLRESKGSDTHNDMLDALLNISKENDMMDKTMIEHLAHDLFIAGTDTTTSTLEWAMTEVVLNPEIMSKAKKELEEVIGKGKAVEESDIARLPYLRAIIKETLRMHPPVPLLLPRKAEIDVDICGLTIPKDAQVLVNVWTIGRDPTLWDNPTLFSPERFLGSEIDVKGRNFELAPFGGGRRICPGMMLAMRMLLLMLGSLINSFDWRLEDGMKPEDMDMEEKFGITLQKAQPLRVVPVNISNY* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02362 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Rops6g02362 499 Pfam Cytochrome P450 34 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 SUPERFAMILY Cytochrome P450 34 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 FunFam Cytochrome P450 76C4 25 492 - -
Rops6g02362 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 495 - -
Rops6g02362 499 CDD CYP76-like 61 493 - -
Rops6g02362 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02362 499 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02362 Rops-Chr6 43038470 43040084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02362 7 494 Cytochrome P450 AT2G45550 45.382 2.68e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02362 - K23810 gmx:100798291 816.994