Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02358 ATGCATCCTCTCCTTTCCCTCCCCATTTGTCAACTCACTCCAACAACACTTCAAGAGATGGAGTTTATAACTTGTGCATTACTCCTCCTAATGTTATGTGCCACCATTCATGCTCTCATTTCATTTCTTACTAGAACCAGAAAGCCAAACCACAAGCTTCCACCTGGCCCTTCCCGTTTTCCCATCATTGGGAACCTCCTTGAACTTGGGAAAAAGCCACACCAATCTTTGGCCAATCTTGCTAAGACTCATGGCCCTTTGATGAGTCTCAAGCTAGGCCGAATAACCACTGTAGTCATCTCCTCAGCTGAGATGGCCAAAGAAGTGCTCCAAACCCATGACCAATTCTTGTCAAACAGACCCATTCCCCAATCTGTGGCAGTTCTCAACCACGAGCACTATACTCTGGCCTTCATGCCCGTGTCACCTCTTTGGCGAGATTTGAAGAAAATATGCAATAATCAACTACTTGCACTCAAGACTCTTGAAGCCAGCCAAGACGTTAGGCGCAAGAAAGTGCAACAACTCCTCTTTGATGTGCACAAAAGTAGCCAAATCGGTGAAGCAGTAGATATTGGAAGAGAAGCATTCAAGACCACCATAAATTTGTTATCAAATACCATTTTCTCTATGGATTTGGTTCAGTCCACAGGTATAGCTGGAGAGTTTAAGGATTTGGTGACAAATATCACAAAACTGGTTGGAGTACCAAACGTAGCAGATTTTTTCCCATTGCTCAAGATAATTGACCCGCAGGGTGTGAAGAGACAACAGACTAAGAACCTTGCCAAGATGTTGGACATCGTCGACCGCTTAGTTAGGCAACGATTGAAGCTGAGGGAAAGCAAAGGTTCTGACACCCAAAATGACATGTTAGATGCGCTGCTCAACATTTCTAAAGAGAACGATATGATGGACAACACAATGATTGGGCATTTGACACATGAGCTTTTTGTTGCGGGAACGGATACAACAACTTCAACGCTTGAATGGGCAATGACTGAAGTAGTACTGAACCCAGAGATCATGTCAAAAGCAAAAAAAGAGCTCGAAGAAGTGATAGGCAAAGGTAAAGCTGTTGAAGAATCAGATATTGCTAGACTCCCTTATTTGCGAGCTATCATAAAAGAGACCCTCCGCTTGCACCCCCCAGTTCCTCTTTTGCTCCCGAGAAAAGCAGAAATAGATGTGGACATATGTGGCCTCACCATCCCTAAGGATGCACAAGTGCTAGTTAATGTGTGGACAATTGGTAGGGACCCAACCTTATGGGACAATCCAACTTTGTTCTCGCCAGAGAGGTTCCTGGGGTCAGAGATTGATGTCAAAGGTCGAAATTTTGAGCTTGCACCATTTGGTGGTGGGAGGAGAATATGCCCTGGCGTGATGTTAGCTATGAGGATGTTGCTCTTGATGTTGGGTTCACTTATCAACTCCTTTGATTGGAGACTTGAACATGGCATGAAGCCAGAAGATATGGACATGGAAGAAAAATTTGGACTGACCTTACAAAAGGCTCAACCCCTTCGAGTTGTTCCTGTTAACATAAGCAACTAA 1557 0.4425 MHPLLSLPICQLTPTTLQEMEFITCALLLLMLCATIHALISFLTRTRKPNHKLPPGPSRFPIIGNLLELGKKPHQSLANLAKTHGPLMSLKLGRITTVVISSAEMAKEVLQTHDQFLSNRPIPQSVAVLNHEHYTLAFMPVSPLWRDLKKICNNQLLALKTLEASQDVRRKKVQQLLFDVHKSSQIGEAVDIGREAFKTTINLLSNTIFSMDLVQSTGIAGEFKDLVTNITKLVGVPNVADFFPLLKIIDPQGVKRQQTKNLAKMLDIVDRLVRQRLKLRESKGSDTQNDMLDALLNISKENDMMDNTMIGHLTHELFVAGTDTTTSTLEWAMTEVVLNPEIMSKAKKELEEVIGKGKAVEESDIARLPYLRAIIKETLRLHPPVPLLLPRKAEIDVDICGLTIPKDAQVLVNVWTIGRDPTLWDNPTLFSPERFLGSEIDVKGRNFELAPFGGGRRICPGVMLAMRMLLLMLGSLINSFDWRLEHGMKPEDMDMEEKFGLTLQKAQPLRVVPVNISN* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02358 518 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 29 515 - -
Rops6g02358 518 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 Pfam Cytochrome P450 54 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 FunFam Cytochrome P450 76C4 45 512 - -
Rops6g02358 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Rops6g02358 518 SUPERFAMILY Cytochrome P450 54 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 Gene3D Cytochrome P450 43 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02358 518 CDD CYP76-like 81 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02358 Rops-Chr6 42969688 42971351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02358 20 514 Cytochrome P450 AT2G45550 46.047 1.78e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02358 - K23810 gmx:100798291 796.193