Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02354 ATGCATTCCTCCGTCGAGGATCATAGCAGCAGCTCCACCACCACCACCACCACCACCGCCGCCAAGTCCCATGCCGACCCCTTCCGTGAGGCCATACGACGCTTCAAATCTGACGGCGGCGGACTCGGAGACCTCCATTTCCTCCACCGCCTAGGAAGTGGCGACATCGGGAGCGTGTACCTGGTGGAGCTAAAAGGGTGCCTCTTTGCTGCGAAGGTGATGGATAAGAAGGAGATGGTGGCGAGGAACAAAGAAAGCAGGGCAAAGGTAGAGAGGGAAATATTGCAAGTGTTGGATCACCCTTTTCTGCCCACCCTTTATGCAACACTCGAAACCCCACGCTGGTCCTGCCTCCTCACTCCGTTTTGCCCCGGCGGTGATCTCCACGTCCTTCGCCACCGCCAGCCAGAGAAACGTTTTCCTGAGGCTGCCGTTAGGTGCGTGTTTCTTTTTGTTCTTTCTATGGTCTCAGTCAGTAGTTTAACTTCGTTTCATTTTAATGTGCATGTAAACATCGTTAGACCATTGTAA 531 0.5367 MHSSVEDHSSSSTTTTTTTAAKSHADPFREAIRRFKSDGGGLGDLHFLHRLGSGDIGSVYLVELKGCLFAAKVMDKKEMVARNKESRAKVEREILQVLDHPFLPTLYATLETPRWSCLLTPFCPGGDLHVLRHRQPEKRFPEAAVRCVFLFVLSMVSVSSLTSFHFNVHVNIVRPL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02354 176 ProSiteProfiles Protein kinase domain profile. 45 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02354 176 SUPERFAMILY Protein kinase-like (PK-like) 40 153 IPR011009 -
Rops6g02354 176 Pfam Protein kinase domain 46 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02354 176 PANTHER FLIPPASE KINASE 1-RELATED 5 146 - -
Rops6g02354 176 Gene3D Phosphorylase Kinase; domain 1 2 149 - -
Rops6g02354 176 FunFam serine/threonine-protein kinase D6PKL2 44 126 - -
Rops6g02354 176 MobiDBLite consensus disorder prediction 1 23 - -
Rops6g02354 176 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02354 Rops-Chr6 42835024 42835554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02354 47 159 AGC Kinase Gene Family AT3G44610 60.000 1.92e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops6g02354 Pkinase 2.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02354 K08286 - gmx:100786154 198.749