Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02349 ATGGATGAAGGGTTGGATGAAGAAGATGTTGTGAGGTCAGTGAGCAGCTTGAGGATGAGCATAGGATCATGGAGCAGGAGGAGTTGGGCCTCAGCAAGTGTTCCTGAGGTGTGGAGTGGACAACATGGGGATGTGTTTGAGAGGAGCAAGAGCAGAAGCAGAAGAAGAGAAGATGATGAAGAGGAGCTGAAGTGGGCAGCCATAGATAGGCTTCCCACATTTGAAAGGCTGAGGAAAAGCATAGTGAAACAAGCTTTAGAGAGTGGAAGGTTCAATTATGAAGAGGTTGACATATCCAATCTTAGTTTGCAGGAAAAGAAGAAACTCCTCGATGGTGTACTAAGAACTGTTGAAGACAATGAAAAGTTTCTCCTTAGAATGAGGGAGAGGATTGATAGGGTTGCTATAGAGATTCCAAAGGTTGAAGTTCGATTTGAGCATTTGTTTGTTGAAGGGGAAGCATTTAATGGAACCAGAGCACTGCCAACACTGTTGAACTCCACCATGAATGTGATAGAGAGAGTTCTTGGATCAATCAAGCTTCTTCCCTCAAAGAAAAGTGTTGTCAAGATTCTTCAAGATGTTAGTGGAATCGTTAGGCCAGCAAGAGTGACACTGCTTTTGGGGCCTCCAAGATCAGGAAAAACTACACTGCTTCAAGCACTGGCTGGGAAACTGGACAGGGATTTAAGGGTATCAGGAAGAGTCACTTACTGTGGTCATGAGTTATCAGAGTTTGTTCCTCAAAGGACATGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGACAGTGAGAGAGACATTGGACTTTTCTGGACGCTGCTTGGGAGTTGGAACAAGGCACGAGCTACTAGTGGAATTGACAAGGCGAGAAAAGCAAGCAGGAATCAAACCAGAGCCAGAGACAGATGCTTTCATGAAAGCCACAGCAATGGCAGGTCAAGAAACAAGTCTCATTACAGATTATGTTCTTAAGATTCTTGGATTGGAAATATGTGCTGATACAATGGTGGGAGATGAGATGAGAAGGGGAATATCTGGTGGAGAGAAAAAACGGTTAACTACTGGTGAGATGTTGGTAGGACCTGCAAAAGTTTTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAAGTCCTTGAGGCAGCTAGTTCATATCATGGATGTTACAATGATAATCTCTCTTTTACAACCTGCACCAGAAACATTTGATCTTTTTGATGACATAATCTTACTTTCAGAAGGTCAGATTGTCTACCAAGGTCCGCGTGAAAATGTTCTCAAATTTTTTGAGAGTGTGGGCTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTCTTACAGGAGGTTACTTCTAGAAAGGACCAAGAGCAGTACTGGTTCATGAAGGACAAACCTTACCATTATATCAGTGTGCCTGAGTTTGTAGCCCACTTCAACAATTATAGCATTGGCCAACAACTTTTTGAAGAGCTCAAGGTTCCTTATGACCGTGCAAAAACTCACCCTGCTGCATTGGTTAAAGATAAATATGGGATCTCAAAACCAGAACTCTTCAAGGCATGCTTTGCAAGAGAGTGGCTATTGGTCAAGCGCAGTGCTTTTATATATATATTTAAGACTACTCAGATAATGATAATGTCTTTGATTGCTATGACAGTGTTTTTTAGAACAGAAATGAAATACGGACAACTTGATGATGGGAGAAAATTTTATGGTGCACTATTCTTCAGTCTGATTAATATAATGTTCAATGGAATGGCTGAGCTGGCAATGACTATTTTCAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTACTATTTTACCCGGCTTGGGCTTTTGCACTGCCCATATGGATCTTTAGGATACCTCTCTCTTTTGTGGAGTCAGCATTATGGGTTGTCCTTACTTATTACACTATTGGGTTTGCTCCAGCTGCAAGTAGATTTTTTCGTCAGCTATTAGCATTCTTCTGCATTCATCAGATGGGTTTGTCTCTATTCCGATTCATTGCTGCTCTTGGAAGAACACAAATTGTGGCAAATACACTTGGTACCTTTATACTGCTACTTGTTTTTTTACTAGGTGGATTCATTATCGCTAAAGATGACATTGAACCGTGGATGATATGGGGCTATTATGCTTCTCCTATGATGTATGGTCAGAATGCCATTGCCATCAATGAATTCCTTGATGAGAGATGGAGTACTCCCAATATAGACCCAAGAGTTCCTGAACCTACAGTTGGAAAGGCTCTTCTCAGGGCTAGAAGCATGTTTACAGAGGACTATTGGTACTGGATTTGTGTTGGTGCTCTCCTTGGCTTTTCTCTGCTTTTCAACATTTGTTTTATTCTTGCTCTGACATTTTTGAATCCATTTGGAGATTCTAAATCTATTATTCTGGAGGAGGAAAACGAGAAAAAGGGAACTAATGAGAGTTCTGTTTCAACTGCTAAATCATTTGAACATGCAGACATTGAAATGGCAGAAAGAAACACCCCAGAGAGTTCAATTCCCAAAGCAGACAATGCAACAACCAAGAGGGGAATGGTGTTACCCTTTAGGCCCCTATCACTTGCTTTTGCTCACGTGAATTACTACATCAATATGCCAACTGAAATGAAAAAACAAGGAGTTGAAGAGAGTCGGCTCCAATTACTAAGAGATGTCAGTGGTGGTTTCAGGCCTGGAGTACTAACAGCATTAGTAGGTGTAACTGGTGCTGGAAAAACCACATTGATGGATGTTCTTGCAGGAAGAAAAACTGGTGGATATATTGAAGGAAGCATCAGCATATCAGGTTACCCAAAGAACCAAGCAACTTTTGCTCGAATCAGTGGATATTGTGAACAAAATGATATCCATTCTCCTAATATAACAGTCTATGAATCTGTTGTGTTTTCTGCTTGGCTACGTCTTGGTAAGGAGGTCAAGAGAGAAATACAGAAGATGTTTGTTGAGGAAGTTATGCAACTCGTTGAGCTAAATCCCGTGAGGAATTTTATAGTAGGCCTTCCTGGCATAGATGGTTTATCAACTGAACAAAGAAAGAGACTCACCATTGCTGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGATGAGCCAACCTCAGGCCTTGATGCTCGAGCTGCAGCAATTGTTATGCGTACTGTCAGAAATACAACTGATACAGGGAGAACTGTAGTCTGTACAATTCATCAACCAAGCATTGACATATTTGAAGCTTTTGATGAGCTACTTCTGATGAAGAGAGGAGGACAAATCATATATGGTGGTCCCCTTGGTCAACAATCTCGGAAGCTTATAGAGTACTTTGAGGCTATCCCAGGAGTTCCTAGAATCAAAGATGGATATAATCCTGCTACATGGATGTTGGAGATCAGTTCTCCAAAAGTTGAGTCTCAGCTTGGTGTAGACTTTGCAGAATTGTACACCAATTCAGAATTGTATCAGAGGAATCAAGAACTTATTGAAGAGCTAAGCACACCATTACCAGGAACAAAGGATCTTAATTTCGCTACTAAATACTCCCAGTCCTTTATAACTCAATGTAAAGCTTGCTTCTGGAAACAGCGATTGTCCTACTGGAGGAACCCTCAGTATAATGTCATCCGGTTCTTTTTGTCAATATCAGTAGGTGTTATTTTTGGACTAGTTTTCTGGAAAAAAGGAGATAAAACAGACAAGGAACAAGATCTTATGAATCTAGCGGGAGCTATGTATTCAGCTATTTTATTTCTTGGAGCCACCAACATTGCCGCAGTTCAACCTGTAGTTGCAATAGAAAGAACTGTGTTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGCTATCCCTTATGCATTTGCCCAGGTAGCAATAGAATGTATTTATGTTGCAGTCCAAACATTGGCCTATACTCTTATCCTTTACTCAATGATTGGATTCATTTGGCAAGCTGACAAGTTCTTGTGGTTCTACTACTTCATATTCTTGTCCTTTATCTACTTCACACTTTATGGAATGATGACTGTGGCTCTGACACCAAACCATCAAATTGCTGCAATTATTATGTCTTTCTTTCTAGTGTTCTGGAACGTATTCTCGGGTTTCGTGATCCCAAAATCGGATATTCCAGTATGGTGGAGGTGGTATTACTGGGGTTGCCCAACTGCTTGGACTATATATGGTCTACTTACATCCCAGTTGGGTGACAATGATACTCCAGTTGAGGTACCTGGATCTGGAACAATATCTGTAAAAGCATACCTTGAGAAACAGATGGGTTATGAATATGGCTTCCTTGGAGTTGTTGCTGTGGCTCATATTGCTTTTGTTGCCTTGTTTCTTTTTGTATTTGCATACGGCATCAAGGTCATTAATTTCCAGAAGAGATAA 4416 0.4081 MDEGLDEEDVVRSVSSLRMSIGSWSRRSWASASVPEVWSGQHGDVFERSKSRSRRREDDEEELKWAAIDRLPTFERLRKSIVKQALESGRFNYEEVDISNLSLQEKKKLLDGVLRTVEDNEKFLLRMRERIDRVAIEIPKVEVRFEHLFVEGEAFNGTRALPTLLNSTMNVIERVLGSIKLLPSKKSVVKILQDVSGIVRPARVTLLLGPPRSGKTTLLQALAGKLDRDLRVSGRVTYCGHELSEFVPQRTCAYISQHNLHHGEMTVRETLDFSGRCLGVGTRHELLVELTRREKQAGIKPEPETDAFMKATAMAGQETSLITDYVLKILGLEICADTMVGDEMRRGISGGEKKRLTTGEMLVGPAKVFLMDEISTGLDSSTTFQIVKSLRQLVHIMDVTMIISLLQPAPETFDLFDDIILLSEGQIVYQGPRENVLKFFESVGFKCPERKGVADFLQEVTSRKDQEQYWFMKDKPYHYISVPEFVAHFNNYSIGQQLFEELKVPYDRAKTHPAALVKDKYGISKPELFKACFAREWLLVKRSAFIYIFKTTQIMIMSLIAMTVFFRTEMKYGQLDDGRKFYGALFFSLINIMFNGMAELAMTIFRLPVFFKQRDLLFYPAWAFALPIWIFRIPLSFVESALWVVLTYYTIGFAPAASRFFRQLLAFFCIHQMGLSLFRFIAALGRTQIVANTLGTFILLLVFLLGGFIIAKDDIEPWMIWGYYASPMMYGQNAIAINEFLDERWSTPNIDPRVPEPTVGKALLRARSMFTEDYWYWICVGALLGFSLLFNICFILALTFLNPFGDSKSIILEEENEKKGTNESSVSTAKSFEHADIEMAERNTPESSIPKADNATTKRGMVLPFRPLSLAFAHVNYYINMPTEMKKQGVEESRLQLLRDVSGGFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPNITVYESVVFSAWLRLGKEVKREIQKMFVEEVMQLVELNPVRNFIVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTTDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQIIYGGPLGQQSRKLIEYFEAIPGVPRIKDGYNPATWMLEISSPKVESQLGVDFAELYTNSELYQRNQELIEELSTPLPGTKDLNFATKYSQSFITQCKACFWKQRLSYWRNPQYNVIRFFLSISVGVIFGLVFWKKGDKTDKEQDLMNLAGAMYSAILFLGATNIAAVQPVVAIERTVFYRERAAGMYSAIPYAFAQVAIECIYVAVQTLAYTLILYSMIGFIWQADKFLWFYYFIFLSFIYFTLYGMMTVALTPNHQIAAIIMSFFLVFWNVFSGFVIPKSDIPVWWRWYYWGCPTAWTIYGLLTSQLGDNDTPVEVPGSGTISVKAYLEKQMGYEYGFLGVVAVAHIAFVALFLFVFAYGIKVINFQKR* 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02349 1471 Pfam Plant PDR ABC transporter associated 755 811 IPR013581 -
Rops6g02349 1471 FunFam ABC transporter G family member 40 884 1114 - -
Rops6g02349 1471 Coils Coil 1470 1471 - -
Rops6g02349 1471 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 879 1122 IPR003439 GO:0005524
Rops6g02349 1471 Pfam ABC-2 type transporter 407 460 IPR043926 GO:0140359
Rops6g02349 1471 Pfam ABC-2 type transporter 1079 1141 IPR043926 GO:0140359
Rops6g02349 1471 Pfam ABC-transporter N-terminal 98 166 IPR029481 -
Rops6g02349 1471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1106 IPR027417 -
Rops6g02349 1471 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 176 449 IPR003439 GO:0005524
Rops6g02349 1471 Gene3D - 178 479 IPR027417 -
Rops6g02349 1471 Pfam ABC-2 type transporter 1195 1408 IPR013525 GO:0016020|GO:0140359
Rops6g02349 1471 Pfam ABC-2 type transporter 528 740 IPR013525 GO:0016020|GO:0140359
Rops6g02349 1471 Pfam ABC transporter 898 1050 IPR003439 GO:0005524
Rops6g02349 1471 Gene3D - 884 1118 IPR027417 -
Rops6g02349 1471 SMART AAA_5 907 1099 IPR003593 GO:0016887
Rops6g02349 1471 SMART AAA_5 201 426 IPR003593 GO:0016887
Rops6g02349 1471 FunFam ABC transporter G family member 34 179 483 - -
Rops6g02349 1471 Pfam ABC transporter 192 374 IPR003439 GO:0005524
Rops6g02349 1471 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 26 1471 - -
Rops6g02349 1471 CDD ABCG_PDR_domain2 867 1105 IPR034003 -
Rops6g02349 1471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 449 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02349 Rops-Chr6 42713833 42724559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02349 895 1082 Calmodulin-binding Proteins AT2G36910 28.079 1.45e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02349 K08711 - gmx:100786666 2479.52