Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02343 ATGGCTACTTTTTCTTTAACTTCAGCTTCTCTTTCCTCTTACTACCATCTCATCTTCACTGCCTTGGCCTTCATTGTTTCAGGCCTAATTTTCTTGCTCACACAGAAAACCAAATCCAATAAGCTCAACCTTCCACCAGGACCCCCTGGATGGCCTATTGTTGGGAACCTGTTTCAAGTTGCACGTTCTGGAAAGACTTTCTTTGAGTATGTGAATGATATGAGAGTGAAATATGGTCCAATTTTCACCCTCAGGATGGGGACAAGGACAATGATCATCCTCACTGATGCAAAACTTGTGCATGAGGCTTATATCCAGAAGGGGGCAGTCTATGCCACAAGGCCTCCAGAGAATCCAACAAGGAACATCTTTAGTGCCAACAAATTCACTGTGAATGCAGCACTTTATGGTTCGGTTTGGAAGTCACTGAGGAGGAACATGGTGCAAAACATGCTGAGTTCAAGCAGGCTCAAGGAGTTTCGTAGTGTTAGAGACAACGCTATGGACAAGCTTATCAACAGGCTTAGAGTTGAAGCTGAGAAGAATAATGGGGTAGTTTGGGTGCTCAAAGATGCCAGGTTTGCTGTTTTTTGCATACTTGTTGCTATGTGTTTTGGTTTAGAGATGGATGAAGAAAAACTTGAGAAAATAGATCAGGTTATGAAGAGTGTCCTCATCACATTGGATCCAAGAATTGATGACTATCTTCCAATTCTAAGCCCCTTTTTCTCAAAGCAAAGAAAGAGAGCATTGGAAGTTCGCAAAGAGCAGATTGAGTTCTTGGTCCCTTTCATTGAGCAAAGAAGAAGAGCAATTCAAAGTCCAGGTTCAGATCACACTGCCACGACCTTTTCCTACCTAGACACACTCTTTGATATGAAAGTTGAAGGGAAAAAATCAGCACCTTCAAATGCTGAATTAGTCTCACTTTGCTCAGAGTTCCTTAATGGTGGCACAGACACAACAGCAACTGCAGTTGAGTGGGGAATTGCACAACTCATAGCCAACCCTGAGGTTCAAACAAAATTGTACCAAGAGATTAAGAGCACTGTGGGTGACAAGAAAGTGGATGAAAAGGACGTTGACAAAATGCCTTATCTACATGCTGTGGTGAAGGAGCTACTAAGGAAGCATCCTCCAACTCACTTTGTACTCGCACATGCTGTGACTGAACCTACCACTTTAGCAGGCTATGACATACCCATTGATGCAAATGTTGAGGTCTACACTCCGGCCATTGGTGAGGACCCTAAATTGTGGTCCAACCCAGAAAATTTTGATCCAGAAAGGTTCATTTGTGGGGGTGAGGAAGCTGACATAACTGGTGTCACAGGAGTGAAGATGATGCCATTTGGTGTGGGAAGAAGGATATGTCCTGGTTTGGCTATGGCCACTGTGCATATTCATCTTATGCTGGCTAGGATGGTTCAGGAGTTTGAATGGAGTGCATATCCACCAGGCAAGAAATTGGATTTCACTGGGAAGTTGGAGTTCACTGTGGTGATGAAAGAGTCTCTAAGAGCAACCATCAAGCCAAGAGGAGAAACAGCACAGTTGTAA 1560 0.4359 MATFSLTSASLSSYYHLIFTALAFIVSGLIFLLTQKTKSNKLNLPPGPPGWPIVGNLFQVARSGKTFFEYVNDMRVKYGPIFTLRMGTRTMIILTDAKLVHEAYIQKGAVYATRPPENPTRNIFSANKFTVNAALYGSVWKSLRRNMVQNMLSSSRLKEFRSVRDNAMDKLINRLRVEAEKNNGVVWVLKDARFAVFCILVAMCFGLEMDEEKLEKIDQVMKSVLITLDPRIDDYLPILSPFFSKQRKRALEVRKEQIEFLVPFIEQRRRAIQSPGSDHTATTFSYLDTLFDMKVEGKKSAPSNAELVSLCSEFLNGGTDTTATAVEWGIAQLIANPEVQTKLYQEIKSTVGDKKVDEKDVDKMPYLHAVVKELLRKHPPTHFVLAHAVTEPTTLAGYDIPIDANVEVYTPAIGEDPKLWSNPENFDPERFICGGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMLARMVQEFEWSAYPPGKKLDFTGKLEFTVVMKESLRATIKPRGETAQL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02343 519 Pfam Cytochrome P450 45 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 FunFam Cytochrome P450 family protein 38 515 - -
Rops6g02343 519 SUPERFAMILY Cytochrome P450 45 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 Gene3D Cytochrome P450 36 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 CDD CYP77_89 77 507 - -
Rops6g02343 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 24 502 - -
Rops6g02343 519 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02343 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02343 Rops-Chr6 42654262 42655933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02343 35 513 Cytochrome P450 AT3G10570 71.816 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02343 K21995 - gmx:100795510 912.138