Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02330 ATGCGTTTGAAGATAGGCCAACGAACCACCATAATGATCTCCTCACCAGACATGGTCAAAGAGGTTTTCCAGACCCTTGATTTATTATTCTCAGATCGACCGGTTCCCGATAATATAACAACTCACAACCACAATCACTATAGCGTGGCCTTCCTCCCGGTTTCACCTCTTTGGCAAGACCTCAGGAAAATATGCCATAGCTATTTATTTGCCAAAAAGACTCTTGATGCAAGCCAAGACCTTAGACGCATGAAGCTGCAAGAACTCCTCCATGATATTCACCGAAGCAGCCTAACCGGTGAAGCAGTTGATATCGGAAGAGCAGCTTTCAAGGCTTCCATTAATTTTTTATCATACACTTTTGCTATATCTCTAGATGATGACTACATGGATATAGTGTCGATTCTCTTGAAAGCAACTGTGGTACCAACCTGGGTGGATTTTTTCCCCGTGTTGAAGATATTGGATCCACAAGGCATTAGAAGACACACAACTACTTACATTTCAAAGCTGTTCCATGTCTTTGACGGCTTGATTGACCAACGATTGAAGCTAAGAGAAGGGAAACATTATGTCACAAACAACGACATGTTAGACACCCTGCTCGACATTTCTCTAGAGAACAACCAGAAGATGGATAGAAAACAGATTAGACATTTATTCTTTGATCTACTCGTGGGGGGAACAGATACAACATCATATGCGTTAGAAAGGGCAATGAGTGAACTACTCCACAACCCAAGAGCCATGTCAAAAGCCAAAAAGGAGCTGGAGAAAACCATTGGAAGAGGTAATCCAATTGAGGAATCAGACATTGCAAGACTTCCATACTTACAAGCAGTGATAAAAGAAACCTTGCGTATGTACCCACCAGCACCGCTTTTACTCCCTCGAAAAGCCAAAATAGACGTGGAAATTTGCGGCTTGACGATACCACAAGGTGCACAAATCCTAATCAATGAGTGGGCTATTGGTAGGAACCCAAGCATATGGGACAATGCGAATTTGTTTTTACCAGAAAGATTCTTGGAATCTGAAATCGATGTGAAAGGTCGACACTTTCAGCTAACCCCATTTGGCAGTGGGCGACGCATATGTCCTGGCTCGCTACTAGCTCTCAGGATGTTGCATCCCATGTTGGATTTCTGA 1149 0.4299 MRLKIGQRTTIMISSPDMVKEVFQTLDLLFSDRPVPDNITTHNHNHYSVAFLPVSPLWQDLRKICHSYLFAKKTLDASQDLRRMKLQELLHDIHRSSLTGEAVDIGRAAFKASINFLSYTFAISLDDDYMDIVSILLKATVVPTWVDFFPVLKILDPQGIRRHTTTYISKLFHVFDGLIDQRLKLREGKHYVTNNDMLDTLLDISLENNQKMDRKQIRHLFFDLLVGGTDTTSYALERAMSELLHNPRAMSKAKKELEKTIGRGNPIEESDIARLPYLQAVIKETLRMYPPAPLLLPRKAKIDVEICGLTIPQGAQILINEWAIGRNPSIWDNANLFLPERFLESEIDVKGRHFQLTPFGSGRRICPGSLLALRMLHPMLDF* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02330 382 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 359 368 IPR017972 GO:0005506|GO:0016705
Rops6g02330 382 PRINTS E-class P450 group I signature 320 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PRINTS E-class P450 group I signature 5 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PRINTS E-class P450 group I signature 366 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PRINTS E-class P450 group I signature 356 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PRINTS E-class P450 group I signature 279 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 Pfam Cytochrome P450 1 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 380 - -
Rops6g02330 382 SUPERFAMILY Cytochrome P450 1 379 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 Gene3D Cytochrome P450 1 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PRINTS P450 superfamily signature 357 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PRINTS P450 superfamily signature 280 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PRINTS P450 superfamily signature 227 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02330 382 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02330 Rops-Chr6 42389916 42391893 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02330 1 380 Cytochrome P450 AT2G45550 41.582 8.78e-107 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02330 - - gmx:100800810 526.554