Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02327 ATGACCACCGCGGCCACACCGCCGGCGACCACCGCGACCACCACCGTCGATATGGGTTCTGCAAGTAGTATAATGCTCCTGATCTTGACATGCACTGTCATTCACGTTGTTCGTTCACTGCATGCTAGAAGCAGAAAAACAAACTACAAGCTTCCACCGGGACCTTCCCTTGTTACTGTCATGGGAAACCTTGCTGAATTGTTCAAAGAACCACATAAGATGCTGGCAAAGCTTGCTGAGATCTATGGCCCAATAATGCGTGTGAAGATAGGCCAACGAACCTTCATAATCATCTCTTCAGCAGACATGGTCAAAGAGGTTCTCCAGACCCATGATATATCATTCTCAGATCGACCAGTTCCCGATAATATAACAAGTCACAACCACAATCACTATAGCGTGGCCTTCCTCCCGCATTCACCTCTTTGGCAAGACCTCAGGAAAATATGTCATAACTATTTATTCGCCAACAAGACACTTGATGCAAGCCAAGACCTTAGACAAATGAAGCTCAAAGATCTCCTCAATGATATGCACCGAAGCGGCCTAGCCGGTGAAGCAGTTGATATTGGAAGAGCAGCTTTCAAGGCTTGCATTAATTTCTTATCTTACTCTTTTGTGTCTCAGGATTTTGTTCTCTCTCTAGATGATGAGCACAACTACAGGGATATAGTGCAGGCTCTCTTGAAAGAAACTGTGGTACCTACCTGGGTGGATTTTTTCCCAGTGTTGAAGATATTGGACCCACGAGGCATTAGAAAGCAGACAACTGCTTACATTTCAAAGCTGTTCCATGTCTTGGACTGCTCAATTGACCAACGATTGAAGGAAAGACAAGAGAAACATTATGTCACAAACAAAGACTTGTTAGAGACCCTACTCGACATTTCTCAAGAGAACAACCAGAAGATGGATAGAAAACAGATTAGACATTTATTCTTTGATCTACTTGTGGCCGGAACAGATACAACAGCATTTGCATTAGAAAGGGCAATGAGTGAACTACTCCACAATCCAGGGGCTATGGCAAAGGCCAAAAAGGAGTTGGAGCAAACCATTGGAAAAGGTAATCCAATTGAGGAATCAGACATTGCAAGACTTCCATACTTACAAGCAGTGATAAAAGAAACCTTGCGTATGTACCCGCCAGCACCGCTTTTACTCCCTCGAAAAGCCAAAATAGATGTAGAAATTTGTGGCCTCACGATACCACAGGATTCCCAAATCCTAATCAATGCGTGGGCCATTGGTAGGAACCCAAGCATATGGGACAATGCAAATTCGTTTTCACCAGAAAGATTCCTGGGATCTGAAATCGATGTGAAAGGTCGTCATTTTCAGCTGACTCCATTTGGCAGTGGGAGACGTATATGTCCTGGCTCGCCACTAGCTATTAGGATGGTGCATTCGATGTTGGGATCGTTGATAAACTGTTTTGATTGGAAACTTGAAAATAATTTGGAGCCAAAGGATATGGACTTGGATCAACCCTTGCGAGCTATTCCAGTTATAATAAACAACTGA 1524 0.4377 MTTAATPPATTATTTVDMGSASSIMLLILTCTVIHVVRSLHARSRKTNYKLPPGPSLVTVMGNLAELFKEPHKMLAKLAEIYGPIMRVKIGQRTFIIISSADMVKEVLQTHDISFSDRPVPDNITSHNHNHYSVAFLPHSPLWQDLRKICHNYLFANKTLDASQDLRQMKLKDLLNDMHRSGLAGEAVDIGRAAFKACINFLSYSFVSQDFVLSLDDEHNYRDIVQALLKETVVPTWVDFFPVLKILDPRGIRKQTTAYISKLFHVLDCSIDQRLKERQEKHYVTNKDLLETLLDISQENNQKMDRKQIRHLFFDLLVAGTDTTAFALERAMSELLHNPGAMAKAKKELEQTIGKGNPIEESDIARLPYLQAVIKETLRMYPPAPLLLPRKAKIDVEICGLTIPQDSQILINAWAIGRNPSIWDNANSFSPERFLGSEIDVKGRHFQLTPFGSGRRICPGSPLAIRMVHSMLGSLINCFDWKLENNLEPKDMDLDQPLRAIPVIINN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02327 507 CDD CYP76-like 79 502 - -
Rops6g02327 507 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 25 496 - -
Rops6g02327 507 Gene3D Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 SUPERFAMILY Cytochrome P450 52 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02327 507 FunFam Cytochrome P450 76C4 43 504 - -
Rops6g02327 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Rops6g02327 507 Pfam Cytochrome P450 52 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02327 Rops-Chr6 42339685 42344497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02327 16 496 Cytochrome P450 AT2G45550 41.582 1.39e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02327 - - gmx:100800810 659.833