Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02326 ATGGATTCTGCAAGTAGTGTACTGCTCCTCGTGTTGACATGCACTGTCATACACGTTCTTCGTTCACTGCATGCTAGAAGCAGAAAAACAAACCGCAAGCTTCCACCAGGTCCTTCCCTTCTCACTATCATGAGAAACTTTACTCAATTGTACAATAAGCCACATCAGACTCTGGCGAAGCTTTCTGAGGTCTATGGCCCAGTAATGAGTTTGAAGGCAGGCCAAGGAACCACCATAATGATCTCATCACCTGACATTGCCAAAGAGATTTTCCAAACCCATGAAACATTGTTCTCAGACCGAACAGTGCCCGATAATACAACAACTCACAACCACAATTATTTTAGCATAGTCTTCCTCCCTGTTTCACCTCTTTGGCAAGACCTCAGGAAAATATGTCATAACCAATTATTCGCCAAAAAGACACTTGATGCAAGCCAAGACCTTAGACAAATGAAGCTCAAAGATCTCCTCAATGATATGCACCGAAGCGGCCTAGCTGGTGAAGCAGTTGATATTGGAAGAGCAGCTTTCAAGGCTTGCATTAATTTCTTATCTTACACTTTTGTCTCTCAGGATTTTGTTATATCTCTAGATGATGAGTACAAGGATATAGTGTCCACTCTTCTGAAATTGATTGGAACTCCAAACTTGGTGGATTATTTCCCAATGTTGAAGACAATGGACCCACAAGGCATTAGAAGGCACACAACTGCTTACGTTTCAAAGGTGTTCCATGCCTTGGATGGCTTGATTGACCAACGAATGAAGCTAAGACAAGAGAAACATTATGTCACAAACAACGACATGTTAGACATCCTGCTCGACATTTCTCAAGAGAACGGCCAGAAGATGGATAAAAAACAGATAAAACATTTACTGCTTGATCTGCTTGTGGCGGGAACTGATACAACAGCAACTGGATTAGAAAGGGCCATGACTGAACTACTCCACAGCCCAGAGGCCATGTTAAAAGCCAAAAAGGAGTTGGAGCAAACCATTGGAAAAGGTAATCCAATTGAGGAACCAGACTTTGCTAGACTTCCATATTTACAAGCAGTGATAAAAGAAGCCTTGCGTATGCACCCTCCAGCTCCGCTTTTACTCCCTCGAAGAGCAAAGATAGACACTGAAATTTCTGGCTACACCATACCACAGGGTGCCCAAATCCTTATCAATGAGTGGGCCATTGGTAGGAACCCAAAGATATGGGACAATGCAAATACGTTTTCACCAGAAAGATTCTTGGGTTCTGAAATTGATGTGAAAGGCCGTCATTTTCAGCTGACCCCGTTTGGCAGTGGGCGACGTATATGTCCTGGTTCGCCACTAGCTGTGAGGATGTTGCATTTGATGTTGGGATCATTGATTAACTGTTTTGACTGGAAACTTGAAAATAATATGGAGCCAAAGGATATGGACTTGGACAAACCCCTGCGAGCTATTCCCGTTATAGTAAACTGA 1464 0.4296 MDSASSVLLLVLTCTVIHVLRSLHARSRKTNRKLPPGPSLLTIMRNFTQLYNKPHQTLAKLSEVYGPVMSLKAGQGTTIMISSPDIAKEIFQTHETLFSDRTVPDNTTTHNHNYFSIVFLPVSPLWQDLRKICHNQLFAKKTLDASQDLRQMKLKDLLNDMHRSGLAGEAVDIGRAAFKACINFLSYTFVSQDFVISLDDEYKDIVSTLLKLIGTPNLVDYFPMLKTMDPQGIRRHTTAYVSKVFHALDGLIDQRMKLRQEKHYVTNNDMLDILLDISQENGQKMDKKQIKHLLLDLLVAGTDTTATGLERAMTELLHSPEAMLKAKKELEQTIGKGNPIEEPDFARLPYLQAVIKEALRMHPPAPLLLPRRAKIDTEISGYTIPQGAQILINEWAIGRNPKIWDNANTFSPERFLGSEIDVKGRHFQLTPFGSGRRICPGSPLAVRMLHLMLGSLINCFDWKLENNMEPKDMDLDKPLRAIPVIVN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02326 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Rops6g02326 487 FunFam Cytochrome P450 76C4 26 484 - -
Rops6g02326 487 Gene3D Cytochrome P450 19 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 CDD CYP76-like 62 483 - -
Rops6g02326 487 SUPERFAMILY Cytochrome P450 35 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g02326 487 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 477 - -
Rops6g02326 487 Pfam Cytochrome P450 35 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02326 Rops-Chr6 42276294 42278468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02326 1 484 Cytochrome P450 AT2G45550 40.000 7.23e-138 405