Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02320 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGATCCAGGGGAATTCTTCCTCTTCCAATGGTGGTGGTGGGAATGTCCAGAGATCCAAAAGCTTTGCTTTTAGGGCACCCCAGGAGAATTACACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCCAAGGTTGTGAGGGCTAAGAAGAAGGACACTGGAACTGTGTATGCATTGAAGATAATGGACAAAAAATTTATTACCAAAGAGAACAAAACAGCTTACGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGATCATCCTGGCATTGTGCGGCTATATTTCACATTTCAAGACACATTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGCCTAACTGAGGATGAGGCACGGTTCTATGCTGCTGAAGTTGTGGATGCTCTCGAATACATACATGGTTTGGGAGTGATACACCGTGATATTAAGCCAGAGAACTTATTACTTACAGCCGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCCATGCAGGATAGCCAAATCACTGTCCTTCCAAATGCAGCATCAGATGACAAAGCCTGCACATTTGTGGGAACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGACCTCTGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCACCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGAAATTCGTTTTCCAGATTACTTCTCAAAGGAAGCAACAGACCTTATTGACCGCCTATTGGATTTGGACCCCAGTAGGAGACCAGGTGCAGGACCTGATGGTTATGCCACTTTGAAAAGGCATCCCTTTTTCAAGGGGGTTGACTGGAATAACTTAAGGGCACAAATTCCTCCAAAACTTGCTCTGGAACCTGGGACTCAGTCGCCTGCTGGTGATGATTCTCATGAGTCATCATGGAGTCCTTCTCACGTTGGGGATGGTACTGTAGCTTCTGCTAGACAACCTGATGGTGCTACATCATCTTCTGAGGGGACTGGTCACATAACCAGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGATCCTGGGGAATCTGTTCTTATGATCTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTTCAGCTCATCCTTACCAACAAACCAAAGTTAATCTATGTGGACCCGTCGAAATTAATTGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATTCAAGTGACGAGTCCATCAAATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGATGCTAAGCAAAGAGCATATCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGAACTTCAATCACTATTTGTTTATGCCAAGATAGCGTGGCCGAGGGACCCAGATGCAATGAAGATAGAGACTCTTTTGTACTTGTAACCTATCAAAATCTTCTTAACGCGTGGTCCAGATTGAAGATAAGGCAAGATTATATCCAATCCATGGTTATGGGACTTGTCACTGATGTTGATATGTTCTGA 1665 0.4198 MLEMEKDFDSKLKIQGNSSSSNGGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKGRLTEDEARFYAAEVVDALEYIHGLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSKEATDLIDRLLDLDPSRRPGAGPDGYATLKRHPFFKGVDWNNLRAQIPPKLALEPGTQSPAGDDSHESSWSPSHVGDGTVASARQPDGATSSSEGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTSPSNFKICTPKKVMSFEDAKQRAYQWKKAIEGLQNRTSITICLCQDSVAEGPRCNEDRDSFVLVTYQNLLNAWSRLKIRQDYIQSMVMGLVTDVDMF* 555
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02320 554 Pfam Protein kinase domain 50 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02320 554 FunFam 3-phosphoinositide-dependent protein kinase 2-like 132 330 - -
Rops6g02320 554 SMART serkin_6 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02320 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Rops6g02320 554 MobiDBLite consensus disorder prediction 332 376 - -
Rops6g02320 554 ProSiteProfiles Protein kinase domain profile. 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02320 554 FunFam 3-phosphoinositide-dependent protein kinase 2-like 46 131 - -
Rops6g02320 554 Coils Coil 473 493 - -
Rops6g02320 554 MobiDBLite consensus disorder prediction 341 376 - -
Rops6g02320 554 MobiDBLite consensus disorder prediction 13 29 - -
Rops6g02320 554 MobiDBLite consensus disorder prediction 1 29 - -
Rops6g02320 554 Gene3D Phosphorylase Kinase; domain 1 46 131 - -
Rops6g02320 554 Gene3D - 367 496 IPR011993 -
Rops6g02320 554 FunFam 3-phosphoinositide-dependent protein kinase 1 364 493 - -
Rops6g02320 554 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 331 - -
Rops6g02320 554 Gene3D Transferase(Phosphotransferase) domain 1 132 330 - -
Rops6g02320 554 Pfam PH domain 390 493 IPR033931 -
Rops6g02320 554 CDD STKc_PDK1 46 315 IPR039046 GO:0004674
Rops6g02320 554 SUPERFAMILY Protein kinase-like (PK-like) 45 367 IPR011009 -
Rops6g02320 554 SUPERFAMILY PH domain-like 309 494 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops6g02320 Rops-Chr6 42042340 42051217 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02320 1 493 AGC Kinase Gene Family AT3G10540 82.556 0.0 842
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Rops6g02320 Pkinase 2.8e-66 CL0016