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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Rops6g02289
ATGTTTTCAACGTTGATAGGTCCCCACGAAGGGAGTGCTGTGCAGGATGGTGGTGTGAATCATGGTCACCTGGGAGACCCGTGTCTTGTTCTTACTTCTGATCCAAAACCTCGTCTTCGTTGGACTACTGACCTTCATGAACGTTTTGTTGATGCTGTCACTCAACTTGGGGGTGCTAGTAAAGCCACACCAAAAGCGATCATGAGGACCATGAATGTCAAGGGTTTGACACTCTATCATTTAAAGAGTCATCTTCAGAAGTACAGGCTTGGTAAGCAATCAGGAAAAGATTCCGATGAGGGATGCAAAGATGGAACATCAGCTTCATATCTTCTAGAAAGCCCTGGTACTGACAACTCATCTCCAAAGTTACCAGCTTCTGATGCAAATGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTACATTTACTGGTGGAGGCAGAGAAGCACTTGCAAATTCGCCAGGATGCAGAACGGAGATATATGGCCATGCTTGAGAGAGCATGTAAGATGTTGGCTGAACAATTTATTAGCGATACCATTATAGACACTGACAGCCAAAAATTTCAAGGATTGGAAAATAAAGCATCAAGAAGTTCCTTAGTTGATTCTGTAGGCTTTTGCTCTTTACCAAGTACTGAGGTAGGTGGAATGCATGTTTCAGAAGTACCACCTATTCTCCAGTCTCAAGGGGCTGACTGCTCCACTGAAAGTTGCCTAACATCACTTGAGAGTATCGGAGGGTTGACTCTAGAAGGATCTCCTGGTGGAACAAAGAAGAGGATGCTGAGCTTAGACTCAATGGTAGCACCTTTGATGTGGAGTGAAACCAACATGAGAACTCAAGGCATCCATTTAACCAAAGTCAATCCTTATGGAACAACTAGGTATGGCATGTAG
924
0.4405
MFSTLIGPHEGSAVQDGGVNHGHLGDPCLVLTSDPKPRLRWTTDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGTSASYLLESPGTDNSSPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMAMLERACKMLAEQFISDTIIDTDSQKFQGLENKASRSSLVDSVGFCSLPSTEVGGMHVSEVPPILQSQGADCSTESCLTSLESIGGLTLEGSPGGTKKRMLSLDSMVAPLMWSETNMRTQGIHLTKVNPYGTTRYGM*
308
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Rops6g02289
307
PANTHER
MYB FAMILY TRANSCRIPTION FACTOR PHL11
17
253
IPR044848
GO:0003700
Rops6g02289
307
MobiDBLite
consensus disorder prediction
91
133
-
-
Rops6g02289
307
FunFam
Myb family transcription factor
35
93
-
-
Rops6g02289
307
Pfam
MYB-CC type transfactor, LHEQLE motif
134
179
IPR025756
-
Rops6g02289
307
Gene3D
-
35
93
-
-
Rops6g02289
307
MobiDBLite
consensus disorder prediction
110
126
-
-
Rops6g02289
307
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
33
93
IPR017930
-
Rops6g02289
307
NCBIfam
myb-like DNA-binding domain, SHAQKYF class
36
91
IPR006447
GO:0003677
Rops6g02289
307
Pfam
Myb-like DNA-binding domain
39
89
IPR001005
-
Rops6g02289
307
SUPERFAMILY
Homeodomain-like
36
92
IPR009057
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Rops6g02289
Rops-Chr6
41502154
41505607
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Rops6g02289
1
251
G2-like Transcription Factor Family
AT3G24120
46.992
1.03e-66
209
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
GARP-G2-like
Rops6g02289
Myb_DNA-binding
1.3e-06
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Rops6g02289
-
-
gmx:100779871
529.635
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