Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02273 ATGTTAGAGACACTTCTGAAGCATGGCTGCCAAAAAAGTACGCTTTTGTATCCTTCCTTTCCCATGAAAATTGAACTCCCCAACACATGGAAGATCATGAACAACACTTCCTATTCTGATAGCCCTTCAGAGAACTCAAATATATGTGCATATTATTCTGTTGGATTATCTATTGGTTTTCTCCTCTTGATGATGTTCATAGCTTTCACTTCATATTGGTGTAGCCAAAGAAACTTGCAAAACATGCAATCTAGAGACAATGCAGAGATCATAGAGAGAGAAAAAACGGTTCATGAGGAAGAACAAGATGCTATCCTAAATAGTTACCCCATGGTGTTGTACTCCCAAGTCAAGCTTCATAATCATTCAGCTGCTCAATATGCTTGGCAGATTACATGTTGTGCCTCTTACCTGATTGTGGTCACTTTTTTTTTCCATAAGGAGTGTATTGACCTGTGGTTTAGACAAAACCTTTCATGTCCCATGTGTCGGAACTCGCCATTCCCAACTCCTCTTCAAACTCCCCTAGCTGAAGTTAATCCCTTGACAACAAGACATGGTTGTGGAGCTCTTAAGTGTTAG 582 0.4003 MLETLLKHGCQKSTLLYPSFPMKIELPNTWKIMNNTSYSDSPSENSNICAYYSVGLSIGFLLLMMFIAFTSYWCSQRNLQNMQSRDNAEIIEREKTVHEEEQDAILNSYPMVLYSQVKLHNHSAAQYAWQITCCASYLIVVTFFFHKECIDLWFRQNLSCPMCRNSPFPTPLQTPLAEVNPLTTRHGCGALKC* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02273 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 166 IPR013083 -
Rops6g02273 193 SUPERFAMILY RING/U-box 144 170 - -
Rops6g02273 193 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 33 178 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02273 Rops-Chr6 41338338 41338919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02273 52 184 C3H Transcription Factor Family AT2G35910 36.184 7.78e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02273 - - gmx:102670414 134.806