Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02270 ATGAAGGGGATGAAAGGAAAATTGGTGAAGAAGCTGAAATCAATCAAACAGATTGGGTATCTGAAGCCAGATAGAGTTCTTCAAGTGAAAGCCTCAGATGGGTATGTTAATTTTCTCCCCAAGATTTCAACTTTCAATATACAGAGCCCGTTTGTTTCCCGAGAAAATGAGCCCAAGAAAATTGTCCAGAACTGCGAGAAAGTGCAGGAGGAAGAACCTGAGGTCATTGACGTGTCAGAGCTCATGAAAGACCTCGAAGAAGAAGAAGAAGAAATGGATTTGGATGATTACAATGACAACAAAGAGAACATTGGACCGTGTTCACTGAAATCCGAACACCAAATTGGTCACAATTGTATTTCACAGAATGGGGTCAGAGAAGAAACAGAGTCAAAACAGAGTGGAGTTTTGAAAGAGAAAAGATCACCACTATCATCAAGAGCTGATAGTGATAGCAAAAGGCAAATCTCTTTGCCGGAAACTGATACTTCATCATTCCGGCGGCCGGACTTGAATTCCGGCAGCCTGTTTGATCCGAATCTTCTGGCTGCATTTGAGCAAGCTGTGAAGGAACATGCTATAATAACAGAAGAGCAGAGAAAAGTCAGAATTGAAGAAGAACCCTCACATAAAAAGGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGACCCTTTGATGTTATTTGAAGAGAAGTGTCCACCAGGGGGTGATGGCAATGTGATTTTCTACACAACAACGCTTAGGGGAATCAGGAAGACATTTGAAGACTGCAACAAAATTCGTTTTCTCCTGCAGAGTTTCAAGGTTCTGTATTTTGAGAGGGACACATCAATGCACAAGGGGTTTAAGGATGAGTTGTGGAGCATTTTGGATGGGAAAATAGTGCCTCCAAGGCTTTTTGTTAAGGGGAGACACATAGGTGGAGCAGAAGAAGTTCTGAGTTTGCTTGAGCAGGGAAAGTTGAAGAAACTCTTTGAAGGGGTTCCAATGGATTTGTCTAATGGTCCATGTGATGCATGTGGTGGGATAAGGTTTGTGCTGTGCTTCAAGTGTAATGGTAGCCACAAGGTTACTTCAGAAAATGAAGAAACCAATCAGTGCCCTCAATGTAATGAGAATGGCTTGATTCATTATGCTGCAGCAAAAGATCTGAAGAAAATGAGAAGCCTGAGAACTTCTACTCCGTATCAATTCGTCAATGAAACAGTGGGGGAATCAGCAGGTTGGGTTATTCCACCATATCCAACTTACTACAGTAATTGGTCACACTCCCAATTCATAAGAGTGGGCGATTCTATAGAATTCGATTTCGATGCCAAATTCTACAACCTGATTCAGGTATCACAGTCTGAGTACGAGCATTGCACAGCTCTTGAACCTATAAAGATATTCAATAGTAGTCCAGTGATATTTCCATTGAAGGAGAGAGGTGTGTACTTCTTCACATGCAGCATCTCAAACTACTGTTGTCTAGGCCAGAAGATTGCCATTTCTGTCCATAAAGAAAATCCCCCATCACCATCATCACCATCACCTTCACCTTCACAAGTACCAGTCTCACCACAATTATCACCAAATGGTTCAGCTCCTCAGCCTCATGGGACTGGTGGTGGTGGCATGAGTAAACCTCCAGCATCTATGCCACCTACTCCAGGAAATAATGGTGGGAATTCTCCTGTTCCAGGTGACAAGTCTAATGCAGTGTCATTGAGGCCACTCTTATCTATGCTTGCTACTTTTTTGGGATTTTTTGGTTATGTAGTGGGAGTATAA 1779 0.4216 MKGMKGKLVKKLKSIKQIGYLKPDRVLQVKASDGYVNFLPKISTFNIQSPFVSRENEPKKIVQNCEKVQEEEPEVIDVSELMKDLEEEEEEMDLDDYNDNKENIGPCSLKSEHQIGHNCISQNGVREETESKQSGVLKEKRSPLSSRADSDSKRQISLPETDTSSFRRPDLNSGSLFDPNLLAAFEQAVKEHAIITEEQRKVRIEEEPSHKKEEEEEDDDDDDDDPLMLFEEKCPPGGDGNVIFYTTTLRGIRKTFEDCNKIRFLLQSFKVLYFERDTSMHKGFKDELWSILDGKIVPPRLFVKGRHIGGAEEVLSLLEQGKLKKLFEGVPMDLSNGPCDACGGIRFVLCFKCNGSHKVTSENEETNQCPQCNENGLIHYAAAKDLKKMRSLRTSTPYQFVNETVGESAGWVIPPYPTYYSNWSHSQFIRVGDSIEFDFDAKFYNLIQVSQSEYEHCTALEPIKIFNSSPVIFPLKERGVYFFTCSISNYCCLGQKIAISVHKENPPSPSSPSPSPSQVPVSPQLSPNGSAPQPHGTGGGGMSKPPASMPPTPGNNGGNSPVPGDKSNAVSLRPLLSMLATFLGFFGYVVGV* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02270 592 MobiDBLite consensus disorder prediction 121 171 - -
Rops6g02270 592 MobiDBLite consensus disorder prediction 157 171 - -
Rops6g02270 592 MobiDBLite consensus disorder prediction 507 521 - -
Rops6g02270 592 CDD Stellacyanin 401 501 - -
Rops6g02270 592 MobiDBLite consensus disorder prediction 131 156 - -
Rops6g02270 592 FunFam Cupredoxin superfamily protein 400 506 - -
Rops6g02270 592 Gene3D Glutaredoxin 240 330 - -
Rops6g02270 592 Gene3D - 402 512 IPR008972 -
Rops6g02270 592 MobiDBLite consensus disorder prediction 503 566 - -
Rops6g02270 592 Pfam Plastocyanin-like domain 418 495 IPR003245 GO:0009055
Rops6g02270 592 MobiDBLite consensus disorder prediction 86 109 - -
Rops6g02270 592 SUPERFAMILY Thioredoxin-like 235 328 IPR036249 -
Rops6g02270 592 ProSiteProfiles Phytocyanin domain profile. 401 503 IPR003245 GO:0009055
Rops6g02270 592 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 68 381 - -
Rops6g02270 592 Pfam Glutaredoxin 243 308 IPR002109 -
Rops6g02270 592 SUPERFAMILY Cupredoxins 404 502 IPR008972 -
Rops6g02270 592 CDD GRX_GRX_like 242 378 - -
Rops6g02270 592 ProSiteProfiles Glutaredoxin domain profile. 230 334 - -
Rops6g02270 592 MobiDBLite consensus disorder prediction 211 225 - -
Rops6g02270 592 MobiDBLite consensus disorder prediction 199 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02270 Rops-Chr6 41326326 41329887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02270 395 558 Phytocyanin Superfamily AT4G28365 33.136 1.15e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02270 K17479 - gmx:100802583 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02270 6 41326326 41329887 Rops6g02270 6 41326326 41329887 ECH