Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02267 ATGCTAACTGGTTTCCTTTTTGTTATGAGTTCCAAGAAAATCATGAGTTCTACATCTAACCAGTTGAGCCAGAGTGGGAGGCTTCTTCCAAGCAAACCAAGGAATGAGGTTAATGTGCAAGGAGAAATCTTCAAAATTAATGGAAAAACAACTTTTGTGATGAACTATGCAAGTTGGTTGAAAGAACATAACAGGCTTATTTCTGAGATACGGAATGCTTTAAATGATCATAATCATCATATTCGTGATGACAAGCTACAGTTACTTATAAACATAATCATGAAGCACTATATTGAACTCTTTGAGATGAAGACAAGGGCTGCAAATGTGGAAGTCTTCAATGTTGGTTCTGCTATTTGGTGCAGAACAGCTGAACGTGATTTGTGGTGGATTGGAGGCTTTTGTCCTTCTGAACTTCTCCAGGTTATTCTGCCTCAACTTCAACATTTGTGCACCCAGCAACAACTTGATATTTTTAATTTTCAACAATTATGTCGACAAGCAGAAGATGCTCTTGCACAAGGCATGGAAAAACTCCAGCAAATCCTTGATAAAGCCACAGCAGCAGGTGACAAGGGATTTCAACTGAAGTATGTCCCTCAACATGTGAGCTTTTTAAAGCAGGCTGATCATCTTCGCCAGGAATTCTTGCATGAATTTTCTCGTCTCCTTACAATTTCTCAGCAAGCTGAATTCTTACTTGCTTTGGGGGAGTTCCTGCATAATCCGCAGCCTTTGAGCTCACTTTAG 750 0.396 MLTGFLFVMSSKKIMSSTSNQLSQSGRLLPSKPRNEVNVQGEIFKINGKTTFVMNYASWLKEHNRLISEIRNALNDHNHHIRDDKLQLLINIIMKHYIELFEMKTRAANVEVFNVGSAIWCRTAERDLWWIGGFCPSELLQVILPQLQHLCTQQQLDIFNFQQLCRQAEDALAQGMEKLQQILDKATAAGDKGFQLKYVPQHVSFLKQADHLRQEFLHEFSRLLTISQQAEFLLALGEFLHNPQPLSSL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02267 249 PANTHER TRANSCRIPTION FACTOR TGA9 42 249 - -
Rops6g02267 249 Pfam Seed dormancy control 67 144 IPR025422 GO:0006351|GO:0043565
Rops6g02267 249 Coils Coil 165 185 - -
Rops6g02267 249 ProSiteProfiles DOG1 domain profile. 49 249 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02267 Rops-Chr6 41301159 41303887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02267 47 248 Calmodulin-binding Proteins AT5G10030 47.170 4.42e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02267 K14431 - gmx:100527435 319.701