Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02252 ATGCCGGGCTTTCCTGTTGTAGCTTGTGAAACATCAGGCACAGATCAACCAAGCCATCAAGATGCTTGTGTCAATTTATCTGCAGAAGAGAAGCTTGCAGCAGAAGAGAGTCTTTCAATTTATTGCAAGCCCATAGAGCTCTACAACATGCTTCGGCGACGTGCTATAAGAAACCCATTATTCCTCCAGAGATGTTTAGACTACAGGATAAAGGCCAAGCACAAGAATAGGATCCAAATGACAGTTTCACTGTTATGGAGTGATGAAGAAACTCAGGCTGTGTTTCCTTTGTCTATCTGTCTGGCTCGGCAGGATCCAAATAATGAAGATGCAGAGTATTCCACTGCTTATCGAATCAGTCGGATATTCACCTTTCGAGATTCCTCTGGCATTGATGGGAATACTCAAATTCAGGCAAGCTTTATGCTCCCTGAAGTTAATAAGCTAGCTGTGGAGGCTAGATCTGGCTCACTTGCTATCTTGTTTTTCACCACTGTGGAAAACCCAAATTCATCATCTGGAGTCAATACAAGCCTGGTGCCTTTGGATTTAACTTCTTGTGAATCAAGAACTGTAGAGCACTGCTTATGCGGGAAAGTATCTTTAGAATCACTTTATATGGCTTGGGATAGTTCTCCAAATTTTAGTTTGGGACAGCGAGCTGAGATTATGTCTACTGTTGATTTGCTTCCATGTACTATGGAGCGTGATTTTCAAAATAAAAGCATTTCAATCCTAGACTCCTGTAGTTCTGAGAATGAGAGTATATCAAAGCAAGTTCAAATCACAATTTCTGCTAAAAAGTTCGGGGCCAAGGAAAAATCTCCCTACCTTACACATCCAAGCAGTGATATGGCATCGCCACCATTATCTCGTATCATTCGGTTGAAAGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTGCAGAGAACAGAAGTCACTGAAGATTTCTCCTGTCCATTCTGTTTGGTTAGATGTGCAAGCTATAAGGGTCTAAGATATCACTTGTTCTCATCTCATGATCTTTTCAACTTTGAATTTTCGGCTTCGGAGGACTCTCAGACTGTAAATGTGTCTGTGAAAGCTGATATTTGGAGATATGAGATTGTTGCAGATGGCATTGATCCAAAATTACAAACTTTTATCTTTTGTGCCAAGCCCCTTAAACGCAGACATCAAAGGACTGTATCTTACAAAGATGCAATGGATGCAGACCCACTGGTCTTAGAGTCTGAAATTCCTGCTGGAGATACTGAGCTTTTGGAGAAGGATGATGGGGTTTCCAATGCAATTATTGTAGCCAATCCTGATCCAGATTGTGACCCTCCAATACCTGAGCATGATCATGGGACTCCTGCAGTGCTACAGGTTGCCAAGACTGGGAAGTTACTAATTGAGCATTCTGACCCACGAAACATTGGCCTGTTGAAGAAGCGACGGTTTTATCACTCACACATAGCCCAGCCAATGACACTTGAAGAAGTTCTATCAGATCAAGATAGTGAAGATGAAGTTGATGAAGAAGTTGTGAACATTGAAGAACAAAGGATATTTGATAATATTGCTGATCTGGGCAAAGAAGTGAAGCAATTCATACATATGTGGAACTCATTTGTTCGGAAGCAGAGGGTGCGGGCAGATGGTCACATTCCTTGGGCATGTGAGGCTTTCTCAAAATTGCATGGCCTTGAGCTTGTTCAAACCCCCAAATTAGCTTGGTGTTGGAGACTATTTATGATCAAACTATATAATCAGAATCTTCTAGATCCGCGGACCATTAATGCATGTGGTATTATTCTTGAACAATACAAGGAGCAGAATTCAGATCCCAAAAGCTAA 1851 0.4111 MPGFPVVACETSGTDQPSHQDACVNLSAEEKLAAEESLSIYCKPIELYNMLRRRAIRNPLFLQRCLDYRIKAKHKNRIQMTVSLLWSDEETQAVFPLSICLARQDPNNEDAEYSTAYRISRIFTFRDSSGIDGNTQIQASFMLPEVNKLAVEARSGSLAILFFTTVENPNSSSGVNTSLVPLDLTSCESRTVEHCLCGKVSLESLYMAWDSSPNFSLGQRAEIMSTVDLLPCTMERDFQNKSISILDSCSSENESISKQVQITISAKKFGAKEKSPYLTHPSSDMASPPLSRIIRLKEGNVMFNYRYYNNKLQRTEVTEDFSCPFCLVRCASYKGLRYHLFSSHDLFNFEFSASEDSQTVNVSVKADIWRYEIVADGIDPKLQTFIFCAKPLKRRHQRTVSYKDAMDADPLVLESEIPAGDTELLEKDDGVSNAIIVANPDPDCDPPIPEHDHGTPAVLQVAKTGKLLIEHSDPRNIGLLKKRRFYHSHIAQPMTLEEVLSDQDSEDEVDEEVVNIEEQRIFDNIADLGKEVKQFIHMWNSFVRKQRVRADGHIPWACEAFSKLHGLELVQTPKLAWCWRLFMIKLYNQNLLDPRTINACGIILEQYKEQNSDPKS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02252 616 CDD VEFS-box_EMF2-like 480 607 - -
Rops6g02252 616 PANTHER POLYCOMB GROUP PROTEIN 25 615 - -
Rops6g02252 616 Pfam VEFS-Box of polycomb protein 469 601 IPR019135 -
Rops6g02252 616 CDD ZnB-Zn_EMF2-like 295 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02252 Rops-Chr6 41034047 41066796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02252 1 608 C2H2 Transcription Factor Family AT5G51230 48.910 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02252 - - gmx:100798991 724.161