Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02251 ATGGCTGTGATCATAAATCTAAAGCTACATCGTTTATTATACCTTGTGATTCTAATAGCAGCAAAAGCAGCATCTCAACCCATGTCAAACTGCCCAAAAAACTGTGGCAATCTTACCATTCCTTACCCGTTTGGGACACATGAGGGTTGTTACTTGGACGACACTTTCCTCATCAGCTGCAACCATAGCTCCACCACACCAATCCCTTTCTTGGGAAAAGACAATATAACCGTACTCAACATATCTCTAGATGGGGAACTTCTTGTTTCAAGTCCAGTAGTCCATGATTGCTATGGTATCAAAGGCAATAATGGTCTTAGTTCTATGGAGGATAAAGGTGTCAATTTGACTCATTTTTCTATCTCACCAAGTAGGAACAAATTTATGGCACTTGGGTGTGACACAGTTGGAATATTCGTGGGCTATGATAGGAACCAAAAACATGCTACAAGAATAGGATGTGTATCCATGTGTAGCACGCTTGATGAAATTAGAACTAATGGATCTTGTTCTGGCACTGGCTGTTGCCAAATTTCAATTCCAGATGGACTATATGGTTTTGAAATGCAAACTTGGAGTATGAACAACCACTCCATGGTACAAGACTTCAATCCATGTAACTATGCGTTTACAACTGAAGAAGGATATTACCACTTCATGTCCAAGGATCTTAATAATCTTGAGAAGAAGAGTGTACCCATGGTGCTTGATTGGGCAGTGGGAAATCAAACATGCCAAGAAGCCCAATATCTTAGTAGCTATGCATGCAAGGCTAAGAATAGTGAGTGCCGCAATTCAACCAATGGAATCGGGTATCTTTGCAAATGTCAACATGGTTTCGAGGGGAACCCTTACCTCCATGATGGCTGCCAAGATATCAATGAATGCAATATGGAGCCTAACCCATGTAGCAGCAAATGCAAAAACCTTGCTGGGAGTTTTAAATGTATGTGTCCAAAGGGACATGAAGGAAATGGGTTTAGAGATGGGGAAGGGTGCCGACCCAAAGACAAATCCACGGGGAATCTCATACTTATAATTGGACTGAGTCTAAGCCTAAGTCTATTGGCAGTAATTGTGGGATGCATAAACATATATCCCCAAATCCGTGAAAGAAAGCTCATCAAAATGAGAGAAGATTATTTTCGACAAAATGGTGGTATATTGTTACAACAACAAGTTGATACACATCATGGGTCAACAGAAAGGGTCACAATCTTCACAGCAGAAGAGCTCAAAAAAGCAACCAACAATTATGATGAGGTTAGAATTATAGGTAAAGGTGGTCATGGAACAGTATATAAAGGTATATTATCAAATGGCAGAGTTGTTGCCATTAAGAAGTCAAAGGTTTCTAACCAAAGTGAGATTGAGCAGTTCATCAATGAAGTGGTTGTGCTTTCCCAAATCAACCACAGGAATGTTGTCAAGTTACTAGGTTGTTGTTTAGAGACAGAAGTTCCCTTACTTGTTTATGAATTCATCACTAATGGGACCCTTTCTGACCATCTACATGTTGAAGAAGGTCAAACACGTAAACCTTCATGGACAACTCGTTTGAGAATTGCTGCAGAGACAGCAGAAGCACTTGCATATTTGCACTCTGCAGCTTCAACACCAATCATACATAGAGATGTCAAAACTGCAAATATACTTTTAGATGACAATCTCACAGCTAAAGTTTCTGATTTTGGAGCTTCAAAACTTGTTCCTCTTGATCAATCTCAATTAACCACTTTGGTGCAAGGAACATTGGGTTACCTTGACCCTGAATACTTTCAAACAAGTCAGTTAACAGAGAAGAGTGATGTTTACAGCTTTGGGGTTGTCTTGGTAGAGTTACTTACAAGCAAGAAAGCACTTTCATTTCTTAGACCTGAGATTCATAGAAATTTGTCTATGTATTTTGTTTCTTCAATGAATGAGGGTCACGTATATCAAATCCTAGACAATGAAATAGTGAGTGATGCAAATGTTGAGCATGTAATAGAAGTTGCTAATCTAGCGAAAAGGTGTCTTAGGCTAAAGGGTGAAGAAAGACCAAGCATGAAAGAAGTGGCATCGGAGTTGGAGGGAATAAGGACTCTGCAAAAACATTCCTTAGGAGCAACTAATGTATCTGAAGAAGAGACTCAGTACTTTCTCAAAGTAAGTTCGCCCACTGACATGGTCGACAATGGAGAAGGTAGTGGTGGTAGCAGTAGTACAATTACTAGGTTTTATGATTTGCAAAACCAGATTTTGAAACCACTAGGTGATGGACGATGA 2268 0.3968 MAVIINLKLHRLLYLVILIAAKAASQPMSNCPKNCGNLTIPYPFGTHEGCYLDDTFLISCNHSSTTPIPFLGKDNITVLNISLDGELLVSSPVVHDCYGIKGNNGLSSMEDKGVNLTHFSISPSRNKFMALGCDTVGIFVGYDRNQKHATRIGCVSMCSTLDEIRTNGSCSGTGCCQISIPDGLYGFEMQTWSMNNHSMVQDFNPCNYAFTTEEGYYHFMSKDLNNLEKKSVPMVLDWAVGNQTCQEAQYLSSYACKAKNSECRNSTNGIGYLCKCQHGFEGNPYLHDGCQDINECNMEPNPCSSKCKNLAGSFKCMCPKGHEGNGFRDGEGCRPKDKSTGNLILIIGLSLSLSLLAVIVGCINIYPQIRERKLIKMREDYFRQNGGILLQQQVDTHHGSTERVTIFTAEELKKATNNYDEVRIIGKGGHGTVYKGILSNGRVVAIKKSKVSNQSEIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLSDHLHVEEGQTRKPSWTTRLRIAAETAEALAYLHSAASTPIIHRDVKTANILLDDNLTAKVSDFGASKLVPLDQSQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSFGVVLVELLTSKKALSFLRPEIHRNLSMYFVSSMNEGHVYQILDNEIVSDANVEHVIEVANLAKRCLRLKGEERPSMKEVASELEGIRTLQKHSLGATNVSEEETQYFLKVSSPTDMVDNGEGSGGSSSTITRFYDLQNQILKPLGDGR* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02251 755 SUPERFAMILY Protein kinase-like (PK-like) 401 691 IPR011009 -
Rops6g02251 755 SUPERFAMILY EGF/Laminin 289 323 - -
Rops6g02251 755 SMART egf_5 244 291 IPR000742 -
Rops6g02251 755 SMART egf_5 295 334 IPR000742 -
Rops6g02251 755 Gene3D Laminin 242 333 - -
Rops6g02251 755 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Rops6g02251 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 697 IPR045274 GO:0007166
Rops6g02251 755 Pfam Calcium-binding EGF domain 292 325 IPR001881 GO:0005509
Rops6g02251 755 CDD STKc_IRAK 425 693 - -
Rops6g02251 755 Gene3D Phosphorylase Kinase; domain 1 387 494 - -
Rops6g02251 755 ProSitePatterns Calcium-binding EGF-like domain signature. 292 316 IPR018097 GO:0005509
Rops6g02251 755 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
Rops6g02251 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Rops6g02251 755 FunFam Wall-associated receptor kinase 2 243 290 - -
Rops6g02251 755 Gene3D Transferase(Phosphotransferase) domain 1 495 716 - -
Rops6g02251 755 Pfam Wall-associated receptor kinase galacturonan-binding 31 86 IPR025287 GO:0030247
Rops6g02251 755 Pfam Protein kinase domain 419 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02251 755 FunFam Fibrillin 2 291 329 - -
Rops6g02251 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Rops6g02251 755 FunFam Wall-associated receptor kinase 2 389 494 - -
Rops6g02251 755 FunFam Wall-associated receptor kinase 2 495 713 - -
Rops6g02251 755 SMART egfca_6 292 334 IPR001881 GO:0005509
Rops6g02251 755 CDD EGF_CA 292 324 - -
Rops6g02251 755 SMART serkin_6 419 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02251 755 ProSiteProfiles Protein kinase domain profile. 419 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02251 Rops-Chr6 41013933 41019506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02251 7 694 Receptor kinase-like Gene Family AT1G21230 47.721 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops6g02251 Pkinase 4.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02251 - - vun:114190859 1075.08