Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02214 ATGACTGGAAGTAATGAAGTCAACCTCAATGAATCTAAGAGTGTTGTTCCACTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTGGCTTACAATCTACTAAGACGTGCTGATGGAACATTCAATAGAGAGTTGGCAGAGTTTCTTGACCGCAAGGTCCCTGCCAATACGATTCCTGTTGATGGGGTTTTCTCTTTTGACCATGTTGATCGAAACACTGGCCTCTTCAATCGGGTGTATCAACCTGCTCCTGAAAATGTATCTCGTTGGGGCATTATGGAGCTGGAAAAGCCCTTGAGTACCACACAGATTGTCCCTGTCATAATTTTCTTCCATGGTGGAAGCTTCACTCACTCCTCTGCCAATAGTGCTATCTATGACACTTTCTGCCGCCGCATTGTGAGCATTTGCAAGGCTGTTGTGGTTTCTGTTAATTACCGGCGATCACCGGAGCATCGATATCCATGTGCTTATGAAGATGGCTGGGCTGCACTTAAGTGGGTTAAATCAAGGACATGGCTTCAGAGTGGAAAGGATTCTAAGGTTTATGTGTACTTGGCGGGGGATAGTTCTGGTGGTAATATTGCTCATCATGTGGCAGTGAGGGCTGCTGAGGAAGATGTTGAGGTACTAGGTAATATTCTTCTTCATCCATTGTTTGGTGGGGAGAAGAGAACAGAATCAGAGAAGAAACTGGATGGAAAGTACTTTGTGAGGTTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTTCCTGAAGGGGAGGACAGAGACCATCCAGCTTGTAACCCGTTTGGCCCCAAGGGAAAAAGCCTTGCAGGACTCAAGTTCCCCAAAAGCCTTGTTTGTGTGGCTGGTTTGGATCTTCTTCAAGATTGGCAATTGGAATATGTGGAAGGTCTCAAGAATTCTGGCCAAGATGTCAAACTTCTTTACCTAAAGGAGGCCACTATCGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATTGCCTCATGAAGGAGATAAACAACTTCGTGAATTCTAACTGTTAA 1035 0.4444 MTGSNEVNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFNRVYQPAPENVSRWGIMELEKPLSTTQIVPVIIFFHGGSFTHSSANSAIYDTFCRRIVSICKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSRTWLQSGKDSKVYVYLAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGKSLAGLKFPKSLVCVAGLDLLQDWQLEYVEGLKNSGQDVKLLYLKEATIGFYFLPNNDHFYCLMKEINNFVNSNC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02214 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Rops6g02214 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Rops6g02214 344 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Rops6g02214 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Rops6g02214 344 FunFam Gibberellin receptor GID1 1 342 - -
Rops6g02214 344 SUPERFAMILY alpha/beta-Hydrolases 62 341 IPR029058 -
Rops6g02214 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02214 Rops-Chr6 40568430 40570908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02214 1 342 Carbohydrate Esterase AT3G63010 78.426 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02214 6 40568430 40570908 Rops6g02214 6 40568430 40570908 ECH
Rops8g02947 8 66139281 66141831 Rops6g02214 6 40568430 40570908 ECH
Rops8g02947 8 66139281 66141831 Rops6g02214 6 40568430 40570908 PCT