Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02212 ATGGGGTCGAAGCCATGGCTGTACCCCGCTCCCACCTATCGACCGCTAGAATCCTACTGGGACACCGACGAAGATGCCCCTGGTCCTCGCTGTGGCCACACCCTCACCGCCATCGCCGCCACCAAGACCCGTGGGCCGCGCTTAATCCTCTTCGGTGGCGCCACTGCCATTGAAGGAGGATCTTCCTCAGCTCCTGGCATTCGATTAGCGGGAGTCACCAATTCCGTTCATTCATATGACATTCAAACGAGAAAATGGACTAGTATTAAAGCTGCCGGAGAGCCGCCCTCTCCTCGGGCTGCTCATGCCGCCGCTGCAGTTGGCACCATGGTCGTTTTCCAGGGTGGGATAGGTCCTGCTGGACATTCTACCGATGATCTATTTGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGAGTCGTTGTACAAGGGCAAGGACCCGGGCTTCGATATGGCCATGTAATGGACTTGGTTGCTCAGAGATATCTTGTTACTGTCAGCGGAAATGATGGGAAACGAGTTGTATCTGATGCTTGGGCTTTTGACACTGCTCAAAAACCTTATGTGTGGCAGAAGCTGAACCCAGAAGGTGATAGACCTTCTGCTAGAATGTATGCAACTGCTAGTGCCCGCTCGGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTGGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACTCTTGCACCTGGAGTTTCCCCTTCCCCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTCCGGGGTGGACGTGCTGTGGAAGGTGAAGCATCCATTGCAGTATTGGATACCGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCACGCTCAAACAAAAGTCATGATTATGACCCTTCTTTGGATCTTATGCGTCGTTGTCGCCATGCAGCAGCAGCTGTTGGTGTTCAAATCTATATCTATGGCGGTCTTAGAGGAGATACTCTACTAGATGATTTCTTAATGGCTGAAAATTCGCCACTTGAGAGAGCTTCTCCTGTTTCTAGTTCCAAACAGAATCAGTCTAATGTAAATTACAATGTAACAACACCAAGTTCGGATAGTGGACCAGATATTCCCTCATCTGGTGGCTCAGGCATGGACAAAAATTCCATGGAGAAACTGAGGGAGGCATCAGCTGCTGAAGCTGAGGCAGCGAGTGCTGTCTGGCAAGCTTTGCAGGCTGTATCAAGTAGTCCTGCCGAAGAAACATCTGTATCAGATGACAACTCACAAGCAGCAGAAACAGTTTCAGATGGAAGTGACACAGAGGGAGATGTTCGGCTTCATCCTAGAGCTGTTGTAGTTGCTAAAGAGACTGTAGGTAACCTAGGTGGAATGGTGAGACAATTGTCACTTGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCCATAAATAATGATTTGCCATATCCTACAAAAAAGTTCACCAGGCAGAAATCCCCTCAAGGTTTACATAAAAAGGTAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTGAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCAACAGCAGGAGACATCACGTATATTGACTACCTTTTTTTGGGAGATTACGTTGATCGAGGACAGCACAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGATTGAATATCCTGAGAATGTTCACTTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTGTTTGGCTTTCGTATAGAGTGCATTGAAAGAATGGGAGAAAATGATGGAATATGGGCATGGACACGATTCAATCAACTTTTTAACTGTCTTCCGCTAGCTGCTCTTATTGAAAAGAAAATTATTTGTATGCATGGTGGCATTGGAAGATCTATCCATTCAGTGGAACAGATAGAGAAACTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAAAATGATAGTGTAGAGGGTTTGAGACCAAATGCGAGAGGGCCAGGACTTGTCACTTTTGGGCCTGACCGTGTTACGGAATTCTGTAAGAAAAATAAATTACAGCTCATCATAAGGGCCCATGAATGTGTGATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACACTATTTTCTGCGACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTAGTTGGTAGGGGTTTGGTTGTGGTTCCAAAATTAATTCATCCCTTACCACCTCCCATTCAGTCACCCGAGACATCCCCAGAGCGTGTCATGGATGAGACATGGATGCAGGAGCTCAATATTCAGAGGCCACCAACTCCTACTCGGGGTCGACCACAGCCTGACCTTGACCGTGGCTCACTAGCATATATATGA 2625 0.4644 MGSKPWLYPAPTYRPLESYWDTDEDAPGPRCGHTLTAIAATKTRGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDIQTRKWTSIKAAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLFVLDLTNDKYKWHRVVVQGQGPGLRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWAFDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKSHDYDPSLDLMRRCRHAAAAVGVQIYIYGGLRGDTLLDDFLMAENSPLERASPVSSSKQNQSNVNYNVTTPSSDSGPDIPSSGGSGMDKNSMEKLREASAAEAEAASAVWQALQAVSSSPAEETSVSDDNSQAAETVSDGSDTEGDVRLHPRAVVVAKETVGNLGGMVRQLSLDQFENESRRMVPINNDLPYPTKKFTRQKSPQGLHKKVISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPIQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02212 874 Gene3D - 10 193 IPR015915 GO:0005515
Rops6g02212 874 PRINTS Serine/threonine phosphatase family signature 789 805 IPR006186 GO:0016787
Rops6g02212 874 PRINTS Serine/threonine phosphatase family signature 677 703 IPR006186 GO:0016787
Rops6g02212 874 PRINTS Serine/threonine phosphatase family signature 571 598 IPR006186 GO:0016787
Rops6g02212 874 PRINTS Serine/threonine phosphatase family signature 707 734 IPR006186 GO:0016787
Rops6g02212 874 PRINTS Serine/threonine phosphatase family signature 639 663 IPR006186 GO:0016787
Rops6g02212 874 PRINTS Serine/threonine phosphatase family signature 767 787 IPR006186 GO:0016787
Rops6g02212 874 PRINTS Serine/threonine phosphatase family signature 606 633 IPR006186 GO:0016787
Rops6g02212 874 MobiDBLite consensus disorder prediction 361 413 - -
Rops6g02212 874 SUPERFAMILY Kelch motif 73 357 IPR015915 GO:0005515
Rops6g02212 874 FunFam Serine/threonine-protein phosphatase 195 363 - -
Rops6g02212 874 FunFam Serine/threonine-protein phosphatase 9 192 - -
Rops6g02212 874 Pfam Galactose oxidase, central domain 29 96 - -
Rops6g02212 874 MobiDBLite consensus disorder prediction 427 463 - -
Rops6g02212 874 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 399 874 - -
Rops6g02212 874 Gene3D - 505 848 IPR029052 -
Rops6g02212 874 ProSitePatterns Serine/threonine specific protein phosphatases signature. 640 645 IPR006186 GO:0016787
Rops6g02212 874 MobiDBLite consensus disorder prediction 850 874 - -
Rops6g02212 874 Gene3D - 194 383 IPR015915 GO:0005515
Rops6g02212 874 SMART pp2a_7 543 829 IPR006186 GO:0016787
Rops6g02212 874 FunFam Serine/threonine-protein phosphatase 508 847 - -
Rops6g02212 874 PIRSF STPPP_BSU1 1 874 IPR012391 GO:0004721|GO:0009742
Rops6g02212 874 MobiDBLite consensus disorder prediction 362 401 - -
Rops6g02212 874 MobiDBLite consensus disorder prediction 427 452 - -
Rops6g02212 874 Pfam Calcineurin-like phosphoesterase 571 778 IPR004843 GO:0016787
Rops6g02212 874 SUPERFAMILY Metallo-dependent phosphatases 526 835 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02212 Rops-Chr6 40536218 40547351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02212 572 770 Calmodulin-binding Proteins AT5G63870 32.609 2.31e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02212 K01090 - gmx:100805538 1647.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02212 6 40536218 40547351 Rops6g02212 6 40536218 40547351 ECH