Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02209 ATGGTTCTTCTGTGTTTCCTTGGGGTTTGCCAAGGAGGCAACCTCGGGAAGAAGTTCTACCGTGATTCATGCCCTCAAGCCGAGGACATTATTAAGAACAAAACCCAACAGCATGTCTCTGCTAATCCCAATTTACCGGCCAAGTTGCTTAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGCTCAGTTTTGTTGAACTCCACTGCCAATAATACTGCAGAGAAGGATGCAATTCCTAATTTATCTTTGGCTGGCTTTGATGTCATTGATGACATAAAAAACGCGGTGGAGGCAAAATGTCCCAAAACTGTATCTTGTGCTGACATACTGGCATTGGCAGCTAGAGACGCTGTTTCAGTCCAATTTAATAAACCTATGTGGGAAGTGCTCACTGGTAGAAGAGATGGCACAGTATCGAACATTAGCGAAGCCTTGGCCAATATCCCAGTACCTTCCTTCAATTTCACCCAACTCAAACAAAGCTTTGCCAGTAAAGGTCTCACTGTACATGATCTGGTTGTATTATCAGGAGCACATACAATTGGAGTAGGCCATTGCAACTTCTTCAGTAACAGGCTTTATAATTTTACCGGAAAAGGTGACCAAGACCCTTCTTTGAATTCCACTTATGCTGCGTTCTTGAAGACCAAATGCCAGAGCCTCAGTGACAACACCACAACGGTAGAGATGGATCCTAGCAGCTCTACCAATTTCGATAGTCACTATTATCCAAACCTTCTCCAGAAAAAGGGTCTGTTCCAATCAGATGCTGCCCTTCTAACAAAAGATGAGACTACAGATATTGCTGAAGAATTGGTTGATCAAAACAAGTTCTTCACAGAGTTCTCGCAGTCAATGAAGAGGATGGGAGCCATTGAGGTCCTCACAGGCTCGGCTGGGGAAATTCGGATCAAGTGTTCAGTTGTCAACTCATAA 945 0.437 MVLLCFLGVCQGGNLGKKFYRDSCPQAEDIIKNKTQQHVSANPNLPAKLLRMHFHDCFVRGCDGSVLLNSTANNTAEKDAIPNLSLAGFDVIDDIKNAVEAKCPKTVSCADILALAARDAVSVQFNKPMWEVLTGRRDGTVSNISEALANIPVPSFNFTQLKQSFASKGLTVHDLVVLSGAHTIGVGHCNFFSNRLYNFTGKGDQDPSLNSTYAAFLKTKCQSLSDNTTTVEMDPSSSTNFDSHYYPNLLQKKGLFQSDAALLTKDETTDIAEELVDQNKFFTEFSQSMKRMGAIEVLTGSAGEIRIKCSVVNS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02209 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Plant peroxidase signature 87 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 Pfam Peroxidase 32 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 Gene3D Peroxidase, domain 2 152 292 - -
Rops6g02209 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Rops6g02209 314 SUPERFAMILY Heme-dependent peroxidases 15 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 FunFam Peroxidase 152 292 - -
Rops6g02209 314 FunFam Peroxidase 18 162 - -
Rops6g02209 314 Gene3D - 18 313 - -
Rops6g02209 314 ProSiteProfiles Plant heme peroxidase family profile. 14 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PANTHER PEROXIDASE 25-RELATED 5 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02209 314 CDD secretory_peroxidase 19 312 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02209 Rops-Chr6 40523251 40524668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02209 3 314 Peroxidase AT1G05260 57.778 4.51e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02209 K00430 - gmx:100799691 565.074