Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02197 ATGAATTTGAGAAGAAGGAGCGCGGAGACAAAATGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTTTCCATTCCATTTCGTTGTTTCGTTGTCCAACAAAACAAAAACAAAACAATTCGTCACGATATTCCAATACCTTCTTCCTTGCTTTGGCTTCTTTCCGTCTATATCAGAAGTTATGGTGACTATGGCCTTCAATTCCAGTTATATTTTAGTGAGATTGGGGTTAGCTTCAACCAGTGCTGAAGCTGAAGCTTCTGTGGAATCAATTAATCTATTTGTGGTTCTCCTTTGTGCTTGTATTATCGTTGGGCATCTTCTTCACAAGAGTCGATGGATGACTGGGTCGATCATTGCCCTCATCATTGGCCTTGTTGCGGGAAACATAATTCTATTCGCAACTGGGAGGAGAAGTTCACGCGTCTTAGTCTTCAATGAACAACTTTTCTTTATATATCTTCTTCCACCTATCATATTTAATGCAGGGTTCCAGGTGAAGAAAAAGCAATTTTTTCGGAACTTTTTGGCAATTAGTTTGTATGGTGTTCTTGGGAGTCTAATATCGTTTATCATTATAGCACTGGGTTCATTCCAGTTGTTCAAAATATTGGACATTGATTTACTGGACTTGGGAGACTATTTTGCACTTGGGGCAGTATTTTCAGCTACAGATTCTGTCTGCACATTACAGGCACTTAATCAGGAAGAGACACCTCTTCTATACAGTCTAGTTTTTGGTGAAGATGTGGTCAATGATGCCACATCTGTGGTTCTTTTTTATGCAATCCAGAGATTTGACTTCTCAAACATCACCTCAGCCAATATCAGGCAGTTTGTTGAAAATTTTATTGGTTTATTCCTGTCAAGCACTTTGCTGGGAGTAGCTGTTGGCTTGCTCAGTGCTTATATTTTAAAGAAGTTCTATTTTGGCAGGCATTCCACTGACAGGGAAATTGCTCTCATGATCCTGATGGCTTACTTTTCTTACATGTTCGCTGAACTTCTCGATCTAAGTGGGATCCTTACTGTGTTCTTTTGTGGGATTCTCATGTCGCACTACACCTGGTATAATGTCTCACAAAATTCTAGAGTCACAAGCAGGCACGCTTTTGCAACTTTTTCTTTCATCTTCGAGAGTTTCATCTTCTTGTATGTTGGTGTGCACGCATTGGATATGGACCAATGGAGATTTGTCAGCAACAGTCCATGGACATTAGTTTGGGCATGTGCAATACTGTTTGGCTTGGTTATGCTTGGAAGGGCAGCTTTTGTGTTTCCCCTATCATTTATAGCCAATTTTTTCCGAAAGTCTGAGACTGACAAGATTGGTTTGAAGCAGCAGTTTGTAATATGGTGGGCTGGGCTCATACGAGGTGCTGTATGCATTGCACTTGCATATAAGAAGTTCACTATACTAGGGCGTACTCGACTGCAAGGGAATGCTGTCATCATCACCAGCACCATTACAGTTGTTCTCTTCACTAATGTGGTGGGTGGATTATTGACCAAGCCTCTAATAAGGTTATTGCTGGATCCCCATAAGCATGTAGGCAGATCAATGCCATCTGATTTGTTTTCTGCTAGGAATCAGCCTGGACTCTCCAATGGTAATGGGCAAACTTCAGAATCTAACAGAGACACTGGCAACACTCTTGATTCGAATCGAAGTGTTCATCATTATTGGCGAATGTTTGATGATACTTTCATGCGCCCTGTTTTTGGTGGCAGGGGACTTGTTCCTGATATTCCTGGTTCATCAAGAGAGGGCACTACTACTCATGAGTAG 1794 0.4136 MNLRRRSAETKCSLSLSLSLSLCVFPFHFVVSLSNKTKTKQFVTIFQYLLPCFGFFPSISEVMVTMAFNSSYILVRLGLASTSAEAEASVESINLFVVLLCACIIVGHLLHKSRWMTGSIIALIIGLVAGNIILFATGRRSSRVLVFNEQLFFIYLLPPIIFNAGFQVKKKQFFRNFLAISLYGVLGSLISFIIIALGSFQLFKILDIDLLDLGDYFALGAVFSATDSVCTLQALNQEETPLLYSLVFGEDVVNDATSVVLFYAIQRFDFSNITSANIRQFVENFIGLFLSSTLLGVAVGLLSAYILKKFYFGRHSTDREIALMILMAYFSYMFAELLDLSGILTVFFCGILMSHYTWYNVSQNSRVTSRHAFATFSFIFESFIFLYVGVHALDMDQWRFVSNSPWTLVWACAILFGLVMLGRAAFVFPLSFIANFFRKSETDKIGLKQQFVIWWAGLIRGAVCIALAYKKFTILGRTRLQGNAVIITSTITVVLFTNVVGGLLTKPLIRLLLDPHKHVGRSMPSDLFSARNQPGLSNGNGQTSESNRDTGNTLDSNRSVHHYWRMFDDTFMRPVFGGRGLVPDIPGSSREGTTTHE* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02197 597 PRINTS Na+/H+ exchanger signature 151 162 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g02197 597 PRINTS Na+/H+ exchanger signature 220 230 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g02197 597 PRINTS Na+/H+ exchanger signature 165 179 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g02197 597 PRINTS Na+/H+ exchanger signature 180 188 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g02197 597 PANTHER SODIUM/HYDROGEN EXCHANGER 82 576 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Rops6g02197 597 MobiDBLite consensus disorder prediction 530 555 - -
Rops6g02197 597 Pfam Sodium/hydrogen exchanger family 97 509 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops6g02197 597 NCBIfam sodium/hydrogen exchanger 3 92 512 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g02197 597 Gene3D - 213 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02197 Rops-Chr6 40430271 40430573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02197 81 591 Antiporters AT3G05030 61.101 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02197 - K14724 cave:132168792 657.521