Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02179 ATGGCGCTCAAGCTTTATGGTCTCGCCATGTCCACAAACACCACCCGTGCCATGATCTGTCTCCATGAGAAAGAGGTGGATTTTGAACTTGTTCCAGTTAATGTGTTCGCTGCAGAACACAAGCAGCCTCCTTTTCTCTCCAAGAACCCCTTTGGTTTGATTCCAGTACTTGAAGACGGTGATCTCACCCTCTTTGAGTCCAGAGCTATTACCGCATATGTAGCTGAAAAATTCAAGGAAGCTGGACCTGATTTGATTAGGCACAACGATGCAAAAGAAGCTGCATTCGTCAAGGCATGGATTGAGGTAGAGTCTCACTACTATGACTCTGCAGTCTCACCCATTATCTATGAATACTTTGTGGCTCCTTTTCAAGGGCAAGAACCCAACAAGTCAGTGATTGACACTAACGTTGAGAAGCTGAAGAATGTGTTAGATGTGTATGAGACCAAGCTGAGCAGCACCAAGTACCTTGCTGGGGACTATTATAGCCTTGCTGATCTTACCCATATCTCTGAAACTCACTATTTTATGCAGACTCCTTGTGCTTCAATGATCAATGATCGTCCCCATGTTAAGGCTTGGTGGGAGGATATCTCTTCTAGGTCTGCTTTCCAAAAAGTTGTGGGAGGAATGACTTTTGGTCAGAATCAGAAATAA 660 0.4439 MALKLYGLAMSTNTTRAMICLHEKEVDFELVPVNVFAAEHKQPPFLSKNPFGLIPVLEDGDLTLFESRAITAYVAEKFKEAGPDLIRHNDAKEAAFVKAWIEVESHYYDSAVSPIIYEYFVAPFQGQEPNKSVIDTNVEKLKNVLDVYETKLSSTKYLAGDYYSLADLTHISETHYFMQTPCASMINDRPHVKAWWEDISSRSAFQKVVGGMTFGQNQK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02179 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Rops6g02179 219 FunFam Glutathione S-transferase F2 2 86 - -
Rops6g02179 219 SUPERFAMILY GST C-terminal domain-like 73 212 IPR036282 -
Rops6g02179 219 SFLD Main.5: Phi-like 1 212 - -
Rops6g02179 219 Pfam Glutathione S-transferase, C-terminal domain 116 202 IPR004046 -
Rops6g02179 219 Gene3D Glutaredoxin 1 86 - -
Rops6g02179 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 219 IPR010987 -
Rops6g02179 219 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Rops6g02179 219 CDD GST_C_Phi 92 209 IPR034347 -
Rops6g02179 219 CDD GST_N_Phi 2 77 - -
Rops6g02179 219 FunFam Glutathione S-transferase F2 88 209 - -
Rops6g02179 219 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Rops6g02179 219 Gene3D - 87 209 - -
Rops6g02179 219 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Rops6g02179 219 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02179 Rops-Chr6 40133302 40134262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02179 1 215 Glutathione S-transferase Gene Family AT3G62760 58.605 7.70e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02179 K00799 - gmx:100815147 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02179 6 40133302 40134262 Rops6g02179 6 40133302 40134262 ECH