Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02178 ATGGCAACAATTAAAGTTCATGGAAGCCCCTTATCTACAGCCACCATGCGAGTCACTGCTACCCTGTATGAGAAACAGCTTGAATTTGAGTTTGTTCCCATTAACATGGCAAATGGTGAACACAAAAAGGAACCCTTCATCTCACTCAATCCATTTGGTCAAGTTCCCGCGTTTGAAGATGGAGATCTTAAGCTTTTTGAATCAAGGGCCATAACACGATATATTGTTCACGAGTATGGTGATAAGGGGGCACAGCTGATAAGCAGTGATTCCAAGAAGATGGCAATAATAGGGGTGTGGCAGGAAGTGGAGAGCCAACATTATGAACAACCAGCTTCAACACTCGTGTGGGAATTGGGGATAAAGCCTATGTATGGGATTCCTACAGATCCAGCAGTTGTGGAAAAGAATGAAGCCAAGCTGGGTACTGTTCTTGACGTCTATGAGAAGAGATTGTCAGAGTCAAAATACTTGGCAGGTGAGTGCTTCACTTTGGTAGATCTGCATCACCTCCCCACTATTTATTACTTGATGAACTCCCAGAGCAAGAAGCTGTTTGAATCACGACCCCGTGTGAGTGCCTGGGTAGCTGATATTACAGCAAGACCAGCTTGGTCTAAGGTCCTTGCCATGCTTAAGCAGTGA 645 0.4481 MATIKVHGSPLSTATMRVTATLYEKQLEFEFVPINMANGEHKKEPFISLNPFGQVPAFEDGDLKLFESRAITRYIVHEYGDKGAQLISSDSKKMAIIGVWQEVESQHYEQPASTLVWELGIKPMYGIPTDPAVVEKNEAKLGTVLDVYEKRLSESKYLAGECFTLVDLHHLPTIYYLMNSQSKKLFESRPRVSAWVADITARPAWSKVLAMLKQ* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02178 214 SFLD Main (cytGST) 1 213 - -
Rops6g02178 214 SUPERFAMILY GST C-terminal domain-like 83 210 IPR036282 -
Rops6g02178 214 SFLD Main.5: Phi-like 1 213 - -
Rops6g02178 214 CDD GST_N_Phi 3 77 - -
Rops6g02178 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 211 - -
Rops6g02178 214 FunFam Glutathione S-transferase F2 88 209 - -
Rops6g02178 214 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Rops6g02178 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Rops6g02178 214 Pfam Glutathione S-transferase, C-terminal domain 112 203 IPR004046 -
Rops6g02178 214 CDD GST_C_Phi 92 209 IPR034347 -
Rops6g02178 214 FunFam Glutathione S-transferase F2 3 87 - -
Rops6g02178 214 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Rops6g02178 214 Gene3D Glutaredoxin 1 87 - -
Rops6g02178 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Rops6g02178 214 Gene3D - 89 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02178 Rops-Chr6 40121809 40122996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02178 1 209 Glutathione S-transferase Gene Family AT1G02920 63.158 1.43e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02178 K00799 - gmx:100799868 355.14